Skip to main content Skip to main navigation menu Skip to site footer
Responsive image
Issue: Vol. 578 No. 1: 4 January 2023
Type: Article
Published: 2023-01-04
DOI: 10.11646/phytotaxa.578.1.7
Page range: 125-135
Abstract views: 114
PDF downloaded: 2

Collybiopsis bambusicola sp. nov. in Yunnan Province, Southwestern China

Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China.
Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China.
Beijing Key Laboratory for Forest Pest Control, School of Forestry, Beijing Forestry University, Beijing 100083, China
Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China.
National Institute of Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing 100050, China
one new taxon Omphalotaceae phylogeny taxonomy Fungi

Abstract

Collybiopsis bambusicola sp. nov. is described and illustrated from Yunnan Province, Southwestern China, based on morphology and molecular phylogenetic analyses. It is characterized by its minute, cream to cinnamon basidiomata, short, eccentric stipe, forked lamellae, nearly poroid hymenophore which are radially arranged from the base of the stipe, 2–spored basidia, oblong ellipsoid basidiospores (6–8.3 × 3–4.3 μm), and gregarious on dead bamboo. In ITS + nLSU based phylogeny, the new species formed a distinct lineage nested within Collybiopsis ramealis complex clade.

References

<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB"><em>Anton</em></span><span lang="en-GB">ín, V. &amp; Noordeloos, M.E. (1993) A monograph of </span><span lang="en-GB"><em>Marasmius</em></span><span lang="en-GB">, </span><span lang="en-GB"><em>Collybia</em></span><span lang="en-GB">, and related genera in Europe: </span><span lang="en-GB"><em>Marasmius</em></span><span lang="en-GB">, </span><span lang="en-GB"><em>Setulipes</em></span><span lang="en-GB">, and </span><span lang="en-GB"><em>Marasmiellus</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>Libri botanici</em></span><span lang="en-GB"> 8: 1–229.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Chenna, R., Sugawara, H., Koike, T., Lopez, R., Gibson, T.J., Higgins, D.G. &amp; Thompson, J.D. (2003) Multiple sequence alignment with the Clustal series of programs. </span><span lang="en-GB"><em>Nucleic Acids Research</em></span><span lang="en-GB"> 31: 3497–3500. https://doi.org/10.1093/nar/gkg500</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Cui, B.K., Li, H.J., Ji, X., Zhou, J.L., Song, J., Si, J., Yang, Z.L. &amp; Dai, Y.C. (2019) Species diversity, taxonomy and phylogeny of Polyporaceae (Basidiomycota) in China. </span><span lang="en-GB"><em>Fungal Diversity</em></span><span lang="en-GB"> 97: 137–392. https://doi.org/10.1007/s13225-019-00427-4</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Desjardin, D.E., Halling, R.E. &amp; Hemmes, D.E. (1999) Agaricales of the Hawaiian Islands. 5. The genera </span><span lang="en-GB"><em>Rhodocollybia </em></span><span lang="en-GB">and </span><span lang="en-GB"><em>Gymnopus</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>Mycologia</em></span><span lang="en-GB"> 91: 166–176. https://doi.org/10.2307/3761206</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Dutta, A.K., Wilson, A.W., Antonín, V. &amp; Acharya, K. (2015) Taxonomic and phylogenetic study on gymnopoid fungi from Eastern India. I. </span><span lang="en-GB"><em>Mycological Progress</em></span><span lang="en-GB"> 14: 1–18. https://doi.org/10.1007/s11557-015-1094-3</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Earle, F.S. (1909) The genera of the North American gill fungi. </span><span lang="en-GB"><em>Bulletin of the New York Botani­cal Garden</em></span><span lang="en-GB"> 5: 373–451.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Gillen, K., Laessoe, T., Kirschner, R. &amp; Piepenbring, M. (2012) </span><span lang="en-GB"><em>Favolaschia</em></span><span lang="en-GB"> species (Agaricales, Basidiomycota) from Ecuador and Panama. </span><span lang="en-GB"><em>Nova Hedwigia</em></span><span lang="en-GB"> 96: 117–165. https://doi.org/10.1127/0029-5035/2012/0070</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. </span><span lang="en-GB"><em>Nucleic Acids Symposium Series</em></span><span lang="en-GB"> 41: 95–98.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Hillis, D.M. &amp; Bull, J.J. (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. </span><span lang="en-GB"><em>Systematics and Biodiversity</em></span><span lang="en-GB"> 42: 182–192. https://doi.org/10.1093/sysbio/42.2.182</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Hughes, K. &amp; Petersen, R.H. (2015) Transatlantic disjunction in fleshy fungi III: </span><span lang="en-GB"><em>Gymnopus confluens</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>MycoKeys</em></span><span lang="en-GB"> 9: 37–63. https://doi.org/10.3897/mycokeys.9.4700</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Hughes, K.W., Mather, D.A. &amp; Petersen, R.H. (2010) A new genus to accommodate </span><span lang="en-GB"><em>Gymnopus acervatus </em></span><span lang="en-GB">(Agaricales). </span><span lang="en-GB"><em>Mycologia</em></span><span lang="en-GB"> 102: 1463–1478. https://doi.org/10.3852/09-318</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Kalyaanamoorthy, S., Minh, B.Q., Wong, T.K., Von Haeseler, A. &amp; Jermiin, L.S. (2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. </span><span lang="en-GB"><em>Nature methods</em></span><span lang="en-GB"> 14: 587–589. https://doi.org/10.1038/nmeth.4285</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Kim, J.S., Cho, Y., Park, K.H., Park, J.H., Kim, M., Kim, C.S. &amp; Lim, Y.W. (2022) Taxonomic study of </span><span lang="en-GB"><em>Collybiopsis</em></span><span lang="en-GB"> (Omphalotaceae, Agaricales) in the Republic of Korea with seven new species. </span><span lang="en-GB"><em>MycoKeys</em></span><span lang="en-GB"> 88: 79–108. https://doi.org/10.3897/mycokeys.88.79266</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Mata, J.L. (2002) Taxonomy and systematics of </span><span lang="en-GB"><em>Lentinula</em></span><span lang="en-GB">, </span><span lang="en-GB"><em>Gymnopus </em></span><span lang="en-GB">and </span><span lang="en-GB"><em>Rhodocollybia </em></span><span lang="en-GB">(Agari­cales, Fungi) with emphasis on oak forests of southern Costa Rica. PhD Thesis, University of Tennessee, Knoxville.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Murrill, W. (1915) Agaricaceae (pars). </span><span lang="en-GB"><em>Flora of North America</em></span><span lang="en-GB"> 9: 286–296.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Oliveira, J.J., Vargas-Isla, R., Cabral, T.S., Rodrigues, D.P. &amp; Ishikawa, N.K. (2019) Progress on the phylogeny of the Omphalotaceae: </span><span lang="en-GB"><em>Gymnopus </em></span><span lang="en-GB">s. str., </span><span lang="en-GB"><em>Marasmiellus </em></span><span lang="en-GB">s. str., </span><span lang="en-GB"><em>Paragymnopus </em></span><span lang="en-GB">gen. nov. and </span><span lang="en-GB"><em>Pusillomyces </em></span><span lang="en-GB">gen. nov. </span><span lang="en-GB"><em>Mycological Progress</em></span><span lang="en-GB"> 18: 713–739. https://doi.org/10.1007/s11557-019-01483-5</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Page, R.D.M. (1996) TreeView: An application to display phylogenetic trees on personal computers. </span><span lang="en-GB"><em>Computer Applications in the Biosciences</em></span><span lang="en-GB"> 12: 357–358.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Petersen, J.H. (1996) </span><span lang="en-GB"><em>The Danish mycological society’s colour-chart. </em></span><span lang="en-GB">Foreningen til Svampekundskabens Fremme, Greve. https://doi.org/10.1093/bioinformatics/12.4.357</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Petersen, R. &amp; Hughes, K. (2014) New North American species of </span><span lang="en-GB"><em>Gymnopus</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>North American Fungi</em></span><span lang="en-GB"> 9: 1–22. https://doi.org/10.2509/naf2014.009.003</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Petersen, R.H. &amp; Hughes, K.W. (2017) An investigation on </span><span lang="en-GB"><em>Mycetinis </em></span><span lang="en-GB">(Euagarics, Basidiomycota). </span><span lang="en-GB"><em>MycoKeys</em></span><span lang="en-GB"> 24: 1–139. https://doi.org/10.3897/mycokeys.24.12846</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Petersen, R.H. &amp; Hughes, K.W. (2021) </span><span lang="en-GB"><em>Collybiopsis </em></span><span lang="en-GB">and its type species, </span><span lang="en-GB"><em>Co. ramealis</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>Mycotaxon</em></span><span lang="en-GB"> 136: 263–349. https://doi.org/10.5248/136.263</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Razaq, A., Ilyas, S. &amp; Khalid, A.N. (2020) Molecular systematics and evolutionary relationships of some inland gilled basidiomycetes from the Himalayan moist temperate forests of Paki­stan based on rDNA marker. </span><span lang="en-GB"><em>Pakistan Journal of Botany</em></span><span lang="en-GB"> 52: 1055–1063. https://doi.org/10.30848/PJB2020-3(3)</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Retnowati, A. (2018) The species of </span><span lang="en-GB"><em>Marasmiellus </em></span><span lang="en-GB">(Agaricales: Omphalotaceae) from Java and Bali. </span><span lang="en-GB"><em>Gardens</em></span><span lang="en-GB">’. </span><span lang="en-GB"><em>Bull, Singapore</em></span><span lang="en-GB"> 70: 191–258. https://doi.org/10.26492/gbs70(1).2018-17</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Ronquist, F. &amp; Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. </span><span lang="en-GB"><em>Bioinformatics</em></span><span lang="en-GB"> 19: 1572–1574. https://doi.org/10.1093/bioinformatics/btg180</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Singer, R. (1973) The genera </span><span lang="en-GB"><em>Marasmiellus</em></span><span lang="en-GB">, </span><span lang="en-GB"><em>Crepidotus </em></span><span lang="en-GB">and </span><span lang="en-GB"><em>Simocybe </em></span><span lang="en-GB">in the neotropics. </span><span lang="en-GB"><em>Beiheftze zur Nova Hedwigia </em></span><span lang="en-GB">44: 1–517. https://doi.org/10.2307/3758379</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Singer, R. (1974) A monograph of </span><span lang="en-GB"><em>Favolaschia</em></span><span lang="en-GB">. </span><span lang="en-GB"><em>Nova Hedwigia</em></span><span lang="en-GB"> 50: 1–108.</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Stamatakis, A. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. </span><span lang="en-GB"><em>Bioinformatics</em></span><span lang="en-GB"> 22: 2688–2690. https://doi.org/10.1093/bioinformatics/btl446</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Vilgalys, R. &amp; Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several</span> <span lang="en-GB"><em>Cryptococcus</em></span><span lang="en-GB"> species</span><span lang="en-GB"><em><strong>. </strong></em></span><span lang="en-GB"><em>Journal of Bacteriology</em></span> <span lang="en-GB">172: 4238–4246.</span><span lang="en-GB"><em><strong> h</strong></em></span><span lang="en-GB">ttps://doi.org/10.1128/jb.172.8.4238-4246.1990</span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">White, T.J., Bruns, T., Lee, S. &amp; Taylor, J. (1990) Amplification and</span> <span lang="en-GB">direct sequencing of fungal ribosomal RNA genes for phylogenetics.</span> <span lang="en-GB"><em>In: </em></span><span lang="en-GB">Innis, M.A., Gelfand, D.H.,</span> <span lang="en-GB">Sninsky, J.J. &amp; White, T.J. (eds.) </span><span lang="en-GB"><em>PCR</em></span> <span lang="en-GB"><em>Protocols</em></span><span lang="en-GB"><em><strong>: </strong></em></span><span lang="en-GB"><em>A Guide to Methods and Applications</em></span><span lang="en-GB">. New York, NY:</span> <span lang="en-GB">Academic Press, pp. 315–322.</span><span lang="en-GB"><em><strong> h</strong></em></span><span lang="en-GB">ttps://doi.org/10.1016/B978-0-12-372180-8.50042-1 </span></span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;"><span lang="en-GB">Wilson, A.W. &amp; Desjardin, D.E. (2005) Phylogenetic relationships in the gymnopoid and marasmioid fungi (Basidiomycota, euagarics clade). </span><span lang="en-GB"><em>Mycologia</em></span><span lang="en-GB"> 97: 667–679. https://doi.org/10.1080/15572536.2006.11832797</span></span></span></span></p>