Abstract
Diversity of lignicolous freshwater fungi in northwestern Yunnan, China is currently being studied. Four fresh collections of tubeufiaceous taxa were collected and identified. Among of them, Parahelicomyces yunnanensis sp. nov and Tubeufia nigroseptum sp. nov. are introduced as new species based on morphology and molecular phylogenetic analysis of combined ITS, SSU, TEF1-α and RPB2 sequence data. The detailed descriptions and illustrations of the new species are provided, as well as the morphological comparison with similar taxa are discussed. Two strains of Neohelicomyces aquaticus and Tubeufia cylindrothecia are provided.
References
<p>Barr, M.E. (1980) On the family Tubeufiaceae (Pleosporales). <em>Mycotaxon</em> 12: 137–167.</p>
<p>Boonmee, S., Zhang, Y., Chomnunti, P., Chukeatirote, E., Tsui, C.K.M., Bahkali, A.H. & Hyde, K.D. (2011) Revision of lignicolous Tubeufiaceae based on morphological reexamination and phylogenetic analysis. <em>Fungal Diversity </em>51: 63–102. https://doi.org/10.1007/s13225-011-0147-4</p>
<p>Boonmee, S., Rossman, A.Y., Liu, J.K., Li, W.J., Dai, D.Q., Bhat, D.J., Jones, E.B.G., McKenzie, E.H.C., Xu, J.C. & Hyde, K.D. (2014) Tubeufiales, ord. nov., integrating sexual and asexual generic names. <em>Fungal Diversity</em> 68: 239–298. https://doi.org/10.1007/s13225-014-0304-7</p>
<p>Brahamanage, R.S., Lu, Y.Z., Bhat, D.J., Wanasinghe, D.N., Yan, J.Y., Hyde, K.D. & Boonmee, S. (2017) Phylogenetic investigations on freshwater fungi in Tubeufiaceae (Tubeufiales) reveals the new genus <em>Dictyospora</em> and new species <em>Chlamydotubeufia aquatica</em> and <em>Helicosporium flavum</em>. <em>Mycosphere</em> 8: 917–933. https://doi.org/10.5943/mycosphere/8/7/8</p>
<p>Cai, L., Tsui, C.K.M., Zhang, K.Q. & Hyde, K.D. (2002) Aquatic fungi from Lake Fuxian, Yunnan, China. <em>Fungal Diversity</em> 9: 57–70. https://doi.org/10.1017/S0953756202005658</p>
<p>Cai, L., Zhang, K., McKenzie, E.H.C. & Hyde, K.D. (2003) Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. <em>Fungal Diversity</em> 13: 1–12. https://doi.org/10.1016/S1567-1356(03)00107-7</p>
<p>Cai, L., Jeewon, R. & Hyde, K.D. (2006) Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology. <em>Mycological Research </em>110: 137–150. https://doi.org/10.1016/j.mycres.2005.09.014</p>
<p>Chaiwan, N., Lu, Y.Z., Tibpromma, S., Bhat, D.J., Hyde, K.D. & Boonmee, S. (2017) <em>Neotubeufa</em> <em>gen. nov.</em> and <em>Tubeufa guangxiensis</em> <em>sp. nov.</em> (Tubeufiaceae) from freshwater habitats. <em>Mycosphere</em> 8: 1443–1456. https://doi.org/10.5943/mycosphere/8/9/9</p>
<p>Chomnunti, P., Hongsanan, S., Aguirre-Hudson, B., Tian, Q., Peršoh, D., Dhami, M.K., Alias, A.S., Xu, J.C., Liu, X.Z., Stadler, M. & Hyde, K.D. (2014) The sooty moulds. <em>Fungal Diversity</em> 66: 1–36. https://doi.org/10.1007/s13225-014-0278-5</p>
<p>Crous, P.W., Schumacher, R.K., Akulov, A., Thangavel, R., Hernández-Restrepo, M., Carnegie, A.J., Cheewangkoon, R. & Wingfield, M.J. (2019) New and Interesting Fungi. 2.<em> Fungal Systematics and Evolution</em> 3: 57–134. https://doi.org/10.3114/fuse.2019.03.06</p>
<p>Dai, D.Q., Phookamsak, R., Wijayawardene, N.N., Li, W.J., Bhat, D.J. & Xu, J.C. (2017) Bambusicolous fungi. <em>Fungal Diversity</em> 82 (1): 1–105. https://doi.org/10.1007/s13225-016-0367-8</p>
<p>Doilom, M., Dissanayake, A.J., Wanasinghe, D.N., Boonmee, S., Liu, J.K., Bhat, D.J., Taylor, J.E., Bahkali, A.H., McKenzie, E.H.C. & Hyde, K.D. (2017) Microfungi on <em>Tectona grandis </em>(teak) in Northern Thailand. <em>Fungal Diversity</em> 82: 107–182. https://doi.org/10.1007/s13225-016-0368-7</p>
<p>Dong, W., Wang, B., Hyde, K.D., McKenzie, E.H.C., Raja, H.A., Tanaka, K., Abdel‑Wahab, M.A., Abdel‑Aziz, F.A., Doilom, M., Phookamsak, R., Hongsanan, S., Wanasinghe, D.N., Yu, X.D., Wang, G.N., Yang, Hao., Yang, J., Thambugala, K.M., Tian, Q., Luo, Z.L., Yang, J.B., Miller, A.N., Fournier, J., Boonmee, S., Hu, D.M., Nalumpang, S. & Zhang, H. (2020) Freshwater Dothideomycetes.<em> Fungal Diversity</em> 105: 319–575. https://doi.org/10.1007/s13225-020-00463-5</p>
<p>Fang, C., Lu, Y.Z., Kang, J.C., Wang, L., Lei, B.X. & Chen, L.Z. (2019) Evaluation of bioactivity of secondary metabolites from fungi of Tubeufiaceae. <em>Mycosystema</em> 38 (4): 560–574. https://doi.org/10.1007/s13205-016-0518-3</p>
<p>Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. <em>Nucleic Acids Symposium Series</em> 41: 95–98. https://doi.org/10.12691/ajmr-6-4-3</p>
<p>Hanada, T., Sato, T., Arioka, M., Uramoto, M. & Yamasaki, M. (1996) Purification and characterization of a 15kDa protein (p15) produced by <em>Helicosporium</em> that exhibits distinct effects on neurite outgrowth from cortical neurons and PC12 cells.<em> Biochemical and Biophysical Research Communications</em> 228 (1): 209–21. https://doi.org/10.1006/bbrc.1996.1641</p>
<p>Hyde, K.D. & Goh, T.K. (1998) Fungi on submerged wood in Lake Barrine, north Queensland, Australia.<em> Mycological Research</em> 102: 739–749. https://doi.org/10.1017/S0953756297005868</p>
<p>Hyde, K.D., Fryar, S., Tian, Q., Bahkali, A.H. & Xu, J.C. (2016a) Lignicolous freshwater fungi along a northsouth latitudinal gradient in the Asian/Australian region; can we predict the impact of global warming on biodiversity and function? <em>Fungal Ecology</em> 19: 190–200. https://doi.org/10.1016/j.funeco.2015.07.002</p>
<p>Hyde, K.D., Hongsanan, S., Jeewon, R., Bhat, D.J., McKenzie, E.H.C., Jones, E.B.G., Phookamsak, R., Ariyawansa, H.A., Boonmee, S., Zhao, Q., Abdel-Aziz, F.A., Abdel-Wahab, M.A., Banmai, S., Chomnunti, P., Cui, B.K., Daranagama, D.A., Das, K., Dayarathne, M.C., de Silva, N.I., Dissanayake, A.J., Doilom, M., Ehanayaka, A.H., Gibertoni, T.B., Góes-Neto, A., Huang, S.K., Jayasiri, S.C., Jayawardena, R.S., Konta, S., Lee, H.B., Li, W.J., Lin, C.G., Liu, J.K., Lu, Y.Z., Luo, Z.L., Manawasinghe, I.S., Manimohan, P., Mapook, A., Niskanen, T., Norphanphoun, C., Papizadeh, M., Perera, R.H., Phukhamsakda, C., Richter, C., de Santiago, A.L.C.M., Drechsler-Santos, E.R., Senanayake, I.C., Tanaka, K., Tennakoon, T.M.D.S., Thambugala, K.M., Tian, Q., Tibpromma, S., Thongbai, B., Vizzini, A., Wanasinghe, D.N., Wijayawardene, N.N., Wu, H.X., Yang, J., Zeng, X.Y., Zhang, H., Zhang, J.F., Bulgakov, T.S., Camporesi, E., Bahkali, A.H., Amoozegar, M.A., Araujo-Neta, L.S., Ammirati, J.F., Baghela, A., Bhatt, R.P., Bojantchev, D., Buyck, B., de Silva, G.A., de Lima, C.L.F., de Oliveira, R.J.V., de Souza, C.A.F., Dai, Y.C., Dima, B., Duong, T.T., Ercole, E., Mafalda-Freire, F., Ghosh, A., Hashimoto, A., Kamolhan, S., Kang, J.C., Karunarathna, S.C., Kirk, P.M., Kytovuori, I, Lantieri, A., Liimatainen, K., Liu, Z.Y., Liu, X.Z, <em>Lücking,</em> R., Medardi, G., Mortimer, P.E., Nguyen, T.T.T., Promputtha, I., Raj, K.N.A., Reck, M.A., Lumyong, S., Shahzadeh-Fazeli, S.A., Stadler, M., Soudi, M.R., Su, H.Y., Takahashi, T., Tangthirasunun, N., Uniyal, P., Wang, Y., Wen, T.C., Xu, J.C., Zhang, Z.K., Zhao, Y.C., Zhou, J.L. & Zhu, L. (2016b) Fungal diversity notes 367-490: taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 80: 1–270. https://doi.org/10.1007/s13225-016-0373-x</p>
<p>Hyde, K.D., Norphanphoun, C., Abreu, V.P., Bazzicalupo, A., Chethana, K.W.T., Clericuzio, M., Dayarathne, M.C., Dissanayake, A.J., Ekanayaka, A.H., He, M.Q., Hongsanan, S., Huang, S.K., Jayasiri, S.C., Jayawardena, R.S., Karunarathna, A., Konta, S., Kušan, I., Lee, H., Li, J., Lin, C.G., Liu, N.G., Lu, Y.Z., Luo, Z.L., Manawasinghe, I.S., Mapook, A., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Siedlecki, I., Soares, A.M., Tennakoon, D.S., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Xiao, Y.P., Yang, J., Zeng, X.Y., Abdel-Aziz, F.A., Li, W.J., Senanayake, I.C., Shang, Q.J., Daranagama, D.A., De Silva, N.I., Thambugala, K.M., Abdel-Wahab, M.A., Bahkali, A.H., Berbee, M.L., Boonmee, S., Bhat, D.J., Bulgakov, T.S., Buyck, B., Camporesi, E., Castañeda-Ruiz, R.F., Chomnunti, P., Doilom, M., Dovana, F., Gibertoni, T.B., Jadan, M., Jeewon, R., Jones, G.E.B., Kang, J.C., Karunarathna, S.C., Lim, Y.W., Liu, J.K., Liu, Z.Y., Plautz, H.L. Jr., Lumyong, S., Maharachchikumbura, S.S.N., Matočec, N., Mckenzie, E.H.C., Mešić, A., Miller, D., Pawłowska, J., Pereira, O.L., Promputtha, I., Romero, A.I., Ryvarden, L., Su, H.Y., Suetrong, S., Tkalčec, Z., Vizzini, A., Wen, T.C., Wisitrassameewong, K., Wrzosek, M., Xu, J.C., Zhao, Q., Zhao, R.L. & Mortimer, P.E. (2017) Fungal diversity notes 603-708: taxonomic and phylogenetic notes on genera and species. <em>Fungal Diversity</em> 87: 1–235. https://doi.org/10.1007/s13225-017-0391-3</p>
<p>Ho, W.H., Hyde, K.D. & Hodgkiss, I.J. (2001) Fungal communities on submerged wood from streams in Brunei, Hong Kong, and Malaysia. <em>Mycological Research</em> 105: 1492–1501. https://doi.org/10.1017/S095375620100507X</p>
<p>Hongsanan, S., Hyde, K.D., Phookamsak, R., Wanasinghe, D.N., McKenzie, E.H.C., Sarma, V.V., Lücking, R., Boonmee, S., Bhat, D.J., Liu, N.J., Tennakoon, D.S., Pem, D., Karunarathna, N., Jiang, S.H., Jones, G.E.B., Phillips, A.J.L., Manawasinghe, I.S., Tibpromma, S., Jayasiri, S.C., Sandamali, D., Jayawardena, R.S., Wijayawardene, N.N., Ekanayaka, A.H., Jeewon, R., Lu, Y.Z., Phukhamsakda, C., Dissanayake, A.J., Zeng, X.Y., Luo, Z.L., Tian, Q., Thambugala, K.M., Dai, D., Samarakoon, M.C., Chethana, K.W.T., Ertz, D., Doilom, M., Liu, J.K., Pérez‑Ortega, S., Suija, A., Senwanna, C., Wijesinghe, S.N., Niranjan, M., Zhang, S.N., Ariyawansa, H.A., Jiang, H.B., Zhang, J.F., Norphanphoun, C., de Silva, N.I., Thiyagaraja, V., Zhang, H., Bezerra, J.D.P., Miranda‑González, R., Aptroot, A., Kashiwadani, H., Harishchandra, D., Sérusiaux, E., Abeywickrama, P.D., Bao, D.F., Devadatha, B., Wu, H.X., Moon, K.H., Gueidan, C., Schumm, F., Bundhun, D., Mapook, A., Monkai, J., Bhunjun, C.S., Chomnunti, P., Suetrong, S., Chaiwan, N., Dayarathne, M.C., Yang, J., Rathnayaka, A.R., Xu, J.C., Zheng, J., Liu, G., Feng, Y. & Xie, N. (2020) Refned families of Dothideomycetes: orders and families incertae sedis in Dothideomycetes. <em>Fungal Diversity</em> 105: 17–318. https://doi.org/10.1007/s13225-020-00462-6</p>
<p>Hsieh, S.Y., Goh, T.K. & Kuo, C.H. (2021) New species and records of <em>Helicosporium</em> sensu lato from Taiwan, with a reflection on current generic circumscription. <em>Mycological Progress</em> 20: 169–190. https://doi.org/10.1007/s11557-020-01663-8</p>
<p>Itazaki, H., Nagashima, K., Sugita, K., Yoshida, H., Kawamura, Y., Yasuda, Y., Matsumoto, K., Ishii, K., Uotani, N., Nakai, H., Terui, A., Yoshimatsu, S., Ikenishi, Y. & Nakagawa, Y. (1990) Solation and structural elucidation of new cyclotetrapeptides, trapoxins A and B, having detransformation activities as antitumor agents. <em>The Journal of Antibiotics</em> 43: 1524–1532.</p>
<p>Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, D.J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon, R., Gareth Jones, E.B., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J., Thorsten Lumbsch, H., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Moncalvo, J.M., Ghobad-Nejhad, M., Nilsson, H., Pang, K.L., Pereira, O.L., Phillips, A.J.L., Raspé, O., Rollins, A.W., Romero, A.I., Etayo, J., Selçuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, T.C., Boonmee, S., Dai, D.Q., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C., Hongsanan, S., Jayawardena, R.S., Li, W.J., Perera, R.H., Phookamsak, R., de Silva, N.I., Thambugala, K.M., Tian, Q., Wijayawardene, N.N., Zhao, R.L., Zhao, Q., Kang, J.C. & Promputtha, I. (2015) The faces of fungi database: fungal names linked with morphology, phylogeny and human impacts. <em>Fungal Diversity</em> 74: 3–18. https://doi.org/10.1007/s13225-015-0351-8</p>
<p>Jayasiri, S.C., Hyde, K.D., Jones, E.B.G., McKenzie, E.H.C., Jeewon, R., Phillips, A.J.L., Bhat, D.J., Wanasinghe, D.N., Liu, J.K., Lu, Y.Z., Kang, J.C., Xu, J. & Karunarathna, S.C. (2019) Diversity, morphology and molecular phylogeny of Dothideomycetes on decaying wild seed pods and fruits. <em>Mycosphere</em> 10 (1): 1–186 https://doi 10.5943/mycosphere/10/1/1</p>
<p>Jeewon, R., Hyde, K.D. (2016) Establishing species boundaries and new taxa among fungi: recommendations to resolve taxonomic ambiguities. <em>Mycosphere</em> 7: 1669–1677. https://doi: 10.5943/mycosphere/7/11/4</p>
<p>Karunarathna, S.C., Udayanga, D., Maharachchikumbura, S.N., Pilkington, M. & Hyde, K.D. (2012) Current status of knowledge of Sri Lankan mycota. <em>Current Research in Environmental & Applied Mycology</em> 2: 18–29. https://doi: 10.5943/cream/2/1/2</p>
<p>Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. <em>Molecular Biology and Evolution</em> 30: 772–780. https://doi: 10.1093/molbev/mst010</p>
<p>Kodsueb, R., Jeewon, R., Vijaykrishna, D., McKenzie, E.H.C., Lumyong, P., Lumyong, S. & Hyde, K.D. (2006) Systematic revision of Tubeufiaceae based on morphological and molecular data. <em>Fungal Diversity</em> 21: 105–130.</p>
<p>Kuo, C.H. & Goh, T.K. (2018a) A new species and a new record of Helicomyces from Taiwan. <em>Mycoscience</em> 59 (5): 433–440. https://doi.org/10.1016/j.myc.2018.04.002</p>
<p>Kuo, C.H. & Goh, T.K. (2018b) Two new species of helicosporous hyphomycetes from Taiwan. <em>Mycological progress</em> 17: 557–569.</p>
<p>Liu, J.K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.M., Ariyawansha, H., Boonmee, S., Chomnunti, P., Dai, D.Q., Bhat, D.J., Romero, A.I., Zhuang, W.Y., Monkai, J., Jones, E.B.G., Chukeatirote, E., Thida, W.K., Zhao, Y.C., Wang, Y. & Hyde, K.D. (2012) Towards a natural classification of Botryosphaeriales. <em>Fungal Diversity </em>57: 149–210. https://doi.org10.1007/s13225-012-0207-4</p>
<p>Liu, J.K., Lu, Y.Z., Cheewangkoon, R. & To-Anun, C. (2018) Phylogeny and morphology of <em>Helicotubeufia</em> gen. nov, with three new species in Tubeufiaceae from aquatic habitats. <em>Mycosphere</em> 9: 495–509. https://doi.org/10.5943/MYCOSPHERE/9/3/4</p>
<p>Liu, N.G., Lu, Y.Z., Bhat, D.J., McKenzie, E.H.C., Saisamorn, L., Jumpathong, J. & Liu, J.K. (2019) <em>Kevinhydea brevistipitata</em> <em>gen. et sp. nov.</em> and <em>Helicoma hydei</em> <em>sp. nov.</em> (Tubeufaceae) from decaying wood habitats. <em>Mycological progress</em> 18: 671–682. https://doi.org10.1007/s11557-019-01480-8</p>
<p>Liu, Y.J., Whelen, S. & Hall, B.D. (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. <em>Molecular Biology and Evolution</em> 16: 1799–1808. https://doi.org/10.1093/oxfordjournals.molbev.a026092</p>
<p>Lu, Y.Z., Boonmee, S., Bhat, D.J., Hyde, K.D. & Kang, J.C. (2017a) <em>Helicosporium luteosporum</em> <em>sp. nov.</em> and <em>Acanthohelicospora aurea</em> (Tubeufiaceae, Tubeufiales) from terrestrial habitats. <em>Phytotaxa</em> 319: 241–253. https://doi.org10.11646/PHYTOTAXA.319.3.3</p>
<p>Lu, Y.Z., Boonmee, S., Dai, D.Q., Liu, J.K., Hyde, K.D., Bhat, D.J. & Kang, J.C. (2017b) Four new species of <em>Tubeufia</em> (Tubeufiaceae, Tubeufiales) from Thailand. <em>Mycological Progress </em>16: 403–417. https://doi.org/10.1007/s11557-017-1280-6</p>
<p>Lu, Y.Z., Boonmee, S., Liu, J.K., Hyde, K.D., Bhat, D.J., Eungwanichayapant, P.D. & Kang, J.C. (2017c) Novel <em>Neoacanthostigma</em> species from aquatic habitats. <em>Cryptogamie Mycologie</em> 38: 169–190. https://doi.org/10.7872/crym/v38.iss2.2017.169</p>
<p>Lu, Y.Z., Liu, J.K., Hyde, K.D., Jeewon, R., Kang, J.C., Fan, C., Boonmee, S., Bhat, D.J., Luo, Z.L. & Lin, C.G. & Eungwanichayapant, P.D. (2018) A taxonomic reassessment of Tubeufales based on multi-locus phylogeny and morphology. <em>Fungal Diversity</em> 92: 131–344. https://doi.org/10.1007/s13225-018-0411-y</p>
<p>Lu, Y.Z., Liu, J.K. & Hyde, K.D. (2020) (2744) Proposal to conserve <em>Pseudohelicomyces</em> Y.Z. Lu & al. (Tubeufiaceae) against <em>Pseudohelicomyces</em> Garnica & E. Valenz. (Hymenogastraceae). <em>Taxon</em> 69 (3): 615–616. https://doi.org/10.1002/tax.12268</p>
<p>Luo, Z.L., Bhat, D.J., Jeewon, R., Boonmee, S., Bao, D.F., Zhao, Y.C., Chai, H.M., Su, H.Y., Su, X.J. & Hyde, K.D. (2017) Molecular phylogeny and morphological characterization of asexual fungi (Tubeufiaceae) from freshwater habitats in Yunnan, China. <em>Cryptogamie Mycologie</em> 38: 27–53. https://doi.org/10.7872/crym/v38.iss1.2017.27</p>
<p>Luo, Z.L., Hyde, K.D., Liu, J.K., Bhat, D.J., Bao, D.F., Li, W.L., Su, X.J., Yang, X.Y. & Su, H.Y. (2018) Lignicolous freshwater fungi from China II: novel <em>Distoseptispora</em> (Distoseptisporaceae) species from northwestern Yunnan Province and a suggested unified method for studying lignicolous freshwater fungi. <em>Mycosphere</em> 9: 444–461. https://doi: 10.5943/mycosphere/9/3/2</p>
<p>Mao, Z.L., Sun, W.B., Fu, L.Y., Luo, H.Y., Lai, D.W. & Zhou, L.G. (2014) Natural dibenzo-α-pyrones and their bioactivities. <em>Molecules</em>, 19 (4): 5088–5108. https://doi.org/10.3390/molecules19045088</p>
<p>Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. <em>In:</em> <em>2010 Gateway Computing Environments Workshop (GCE)</em>. pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129</p>
<p>Nguanhom, J., Cheewangkoon, R., Groenewald, J.Z., Braun, U., To-Anun, C. & Crous, P.W. (2015) Taxonomy and phylogeny of <em>Cercospora </em>spp. from Northern Thailand. <em>Phytotaxa</em> 233: 27–48. https://doi.org/:10.11646/phytotaxa.233.1.2</p>
<p>Nylander, J.A.A. (2004) MrModeltest v2 Program distributed by the author. Evolutionary Biology Centre, Uppsala University: Uppsala, Sweden.</p>
<p>Ohtsu, Y., Sasamura, H., Shibata, T., Nakajima, H., Hino, M. & Fujii, T. (2003b) The novel gluconeogenesis inhibitors FR225659 and related compounds that originate from <em>Helicomyces </em>sp. No. 19353. II. Biological profiles. <em>The Journal of Antibiotics</em> 56 (8): 689–693. https://doi.org/:10.7164/ANTIBIOTICS.56.682</p>
<p>Ohtsu, Y., Sasamura, H., Tsurumi, Y., Yoshimura, S., Takase, S., Hashimoto, M., Shibata, T., Hino, M. & Fujii, T. (2003a) The novel gluconeogenesis inhibitors FR225659 and related compounds that originate from <em>Helicomyces</em> sp. No. 19353. I. Taxonomy, fermentation, isolation and physico-chemical properties. <em>The Journal of Antibiotics</em> 56 (8): 682–688. http://doi.org/10.7164/antibiotics.56.689</p>
<p>Phookamsak, R., Hyde, K.D., Jeewon, R., Bhat, D.J., Jones, E.B.G., Maharachchikumbura, S.S.N., Raspé, O., Karunarathna, S.C., Wanasinghe, D.N., Hongsanan, S., Doilom, M., Tennakoon, D.S., Machado, A.R., Firmino, A.L., Ghosh, A., Karunarathna, A., Mesic, A., Dutta, A.K., Thongbai, B., Devadatha, B., Norphanphoun, C., Senwanna, C., Wei, DP., Pem, D., Achah, F.K., Wang, G.N., Jiang, H.B., Madrid, H., Lee, H.B., Goonasekara, I.D., Manawasinghe, I.S., Kusan, I., Cano, J., Gene, J., Li, JF., Das, K., Acharya, K., Raj, K.N.A., Latha, K.P.D., Chethana, K.W.T., He, M.Q., Duenas, M., Jadan, M., Martin, M.P., Samarakoon, M.C., Dayaratne, M.C., Raza, M., Park, M.S., Tellaria, M.T., Chaiwan, N., Matocec, N., de Silva, N.I., Pereira, O.L., Singh, S.K., Vadthanarat, S., Oh, S.Y., Huang, S.K., Rana, S., Konta, S., Paloi, S., Jayasiri, S.C., Jeon, S.J., Mehmood, T., Gibertoni, T.B., Nguyenm, T.T.T., Singhe, U., Thiyagaraja, V., Sharma, V.V., Dong, W., Yu, X.D., Lu, Y.Z., Lim, Y.W., Chen, Y., Tkalcec, Z., Zhang, J.F., Luo, Z.L., Daranagama, D.A., Thambugala, K.M., Tibpromma, S., Camporesi, E., Bulgokov, T.B., Dissanayake, A.J., Senanayake, I.C., Dai, D.Q., Tang, L.Z., Khan, S., Zhang, H., Promputta, I., Cai, L., Chomnuti, P., Zhao, R.L., Lumyong, S., Boonmee, S., Wen, T.C., Mortimer, P.E. & Xu, J.C. (2019) Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. <em>Fungal Diversity</em> 95: 1–273. https://doi.org/10.1007/s13225-019-00421-w</p>
<p>Penzig, O.A.J. & Saccardo, P.A. (1897) Diagnoses fungorum novorum in Insula Java collectorum. Series secunda. <em>Malpighia</em> 11: 491–530.</p>
<p>Promputtha, I. & Miller, A.N. (2010) Three new species of <em>Acanthostigma</em> (Tubeufiaceae, Dothideomycetes) from Great Smoky Mountains National Park. <em>Mycologia</em> 102: 574–587. http://doi.org/10.3852/09-051</p>
<p>Rambaut, A. (2014) FigTree 1.4.2. Avaialble from: http://tree.bio.ed.ac.uk/software/ figtree (accessed 9 July 2014)</p>
<p>Ranala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. <em>Journal of Molecular Evolution</em> 43: 304–311. https://doi.org/10.1007/BF02338839</p>
<p>Rajeshkumar, K.C., Bhat, D.J., Lad, S.S., Wijayawardene, N.W., Singh, S.K., Pandkar, M.R., Maurya, D.K., Ashtekar, N.D. & Hyde, K.D. (2018) Morphology and phylogeny of <em>Tamhinispora srinivasanii</em> <em>sp. nov.</em> (Tubeufiaceae) from northern Western Ghats, India. <em>Phytotaxa </em>346: 113–120. https://doi.org/10.11646/PHYTOTAXA.346.1.7</p>
<p>Rajeshkumar, K.C., Hyde, K.D., Wijayawardene, N.N., Madrid, H. & Fatima, S. (2019) Tubeufia sahyadriensis (Tubeufiaceae), a new dictyosporous anamorph from the Western Ghats, India.<em> Phytotaxa</em> 423 (3): 171–181. https://doi.org/10.11646/phytotaxa.423.3.5</p>
<p>Ronquist, F., Huelsenbeck, J.P. (2003) MrBayes3: bayesian phylogenetic inference under mixed models. <em>Bioinformatics</em> 19: 1572–1574. https://doi.org/10.1093/ bioinformatics/btg180</p>
<p>Sánchez, R.M., Miller, A.N. & Bianchinotti, M.V. (2012) A new species of <em>Acanthostigma</em> (Tubeufiaceae, Dothideomycetes) from the southern hemisphere. <em>Mycologia </em>104 (1): 223–231. https://doi.org/10.3852/11-105</p>
<p>Schoch, C.L., Shoemaker, R.A., Seifert, K.A., Hambleton, S., Spatafora, J.W. & Crous, P.W. (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. <em>Mycologia</em> 98 (6): 1041–1052. https://doi.org/10.1080/15572536.2006.11832632</p>
<p>Slippers, B., Boissin, E., Phillips, A.J.L., Groenewald, J.Z., Lombard, L., Wingfield, M.J., Postma, A., Burgess,T. & Crous, P.W. (2013) Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework. <em>Study in Mycology</em> 76 (1): 31–49. https://doi.org/10.3114/sim0020</p>
<p>Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. <em>Bioinformatics </em>22: 2688–2690. https://doi.org/10.1093/bioinformatics/btl446</p>
<p>Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web-servers. <em>Systematic Biology </em>75: 758–771. https://doi.org/10.1080/10635150802429642</p>
<p>Su, H.Y., Udayanga, D., Luo, Z.L., Manamgoda, D.S., Zhao, Y.C., Yang, J., Liu, X.Y., Mckenzie, E.H.C. & Hyde, K.D. (2015) Hyphomycetes from aquatic habitats in Southern China: Species of <em>Curvularia</em> (Pleosporaceae) and <em>Phragmocephala</em> (Melannomataceae).<em> Phytotaxa</em> 226 (3): 201–216. https://doi.org/10.11646/PHYTOTAXA.226.3.1</p>
<p>Thambugala, K.M., Daranagama, D.A., Phillips, A.J.L., Bulgakov, T.S., Bhat, D.J., Camporesi, E., Bahkali, A.H., Eungwanichayapant, P.D., Liu, Z.Y. & Hyde, K.D. (2017) Microfungi on <em>Tamarix</em>. <em>Fungal Diversity</em> 82: 239–306. https://doi.org/10.1007/s13225-016-0371-z</p>
<p>Tibpromma, S., Hyde, K.D., McKenzie, E.H.C., Bhat, D.J., Phillips, A.J.L., Wanasinghe, D.N., Samarakoon, M.C., Jayawardena, R.S., Dissanayake, A.J., Tennakoon, D.S., Doilom, M., Phookamsak, R., Tang, A.M.C., Xu, J., Mortimer, P.E., Promputtha, I., Maharachchikumbura, S.S.N., Khan, S. & Karunarathna, S.C. (2018) Fungal diversity notes 840–928: micro-fungi associated with Pandanaceae. <em>Fungal Diversity</em> 93: 1–160. https://doi.org/10.1007/s13225-018-0408-6</p>
<p>Tsui, C.K.M., Sivichai, S. & Berbee, M.L. (2006) Molecular systematics of<em> Helicoma, Helicomyces</em> and <em>Helicosporium</em> and their teleomorphs inferred from rDNA sequences. <em>Mycologia</em> 98: 94–104. https://doi.org/10.3852/mycologia.98.1.94</p>
<p>Tsui, C.K.M., Sivichai, S., Rossman, A.Y. & Berbee, M.L. (2007) <em>Tubeufia</em> <em>asiana</em>, the teleomorph of <em>Aquaphila albicans </em>in the Tubeufiaceae, Pleosporales, based on cultural and molecular data. <em>Mycologia</em> 99: 884–894. https://doi.org/10.1080/15572536.2007.11832520</p>
<p>Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several <em>Cryptococcus</em> species. <em>Journal of Bacteriology</em> 172: 4238–4246.</p>
<p>Wu, F., Zhou, L.W. & Dai, Y.C. (2016) <em>Neomensularia duplicata gen. et sp. nov.</em> (Hymenochaetales, Basidiomycota) and two new combinations. <em>Mycologia</em> 108, 891–898.</p>
<p>Yoshimura, S., Zenkoh, T., Ohtsu, Y., Kanasaki, R., Shigematsu, N., Takase, S. & Neya, M. (2003) Isolation, structure determination and biological study of novel gluconeogenesis inhibitors, FR225659 family. <em>Symposium on The Chemistry of Natural Products</em> 45: 281–286. https://doi.org/10.24496/tennenyuki.45.0_281</p>
<p>Zhao, G.Z., Liu, X. & Wu, W. (2007) Helicosporous hyphomycetes from China. <em>Fungal Diversity</em> 26: 313–524.</p>
<p>Zhou, L.W., Vlasák, J., Qin, W.M. & Dai, Y.C. (2016a) Global diversity and phylogeny of the <em>Phellinus igniarius </em>complex (Hymenochaetales, Basidiomycota) with the description of five new species. <em>Mycologia</em> 108: 192–204.</p>
<p>Zhou, L.W., Vlasák, J. & Dai, Y.C. (2016b) Taxonomy and phylogeny of <em>Phellinidium </em>(Hymenochaetales, Basidiomycota): A redefinition and the segregation of <em>Coniferiporia gen. nov.</em> for forest pathogens. <em>Fungal Biology</em> 120: 988–1001.</p>
<p>Zenkoh, T., Ohtu, Y., Yoshimura, S., Shigematsu, N., Takase, S. & Hino, M. (2003) The novel gluconeogenesis inhibitors FR225659 and FR225656 from <em>Helicomyces</em> sp. No. 19353. III. Structure determination. <em>The Journal of Antibiotics</em> 56 (8): 694–699. https://doi.org/10.1002/chin.200405155</p>