Abstract
Leptosphaeria chatkalica, found on dead stems of dicotyledon from Chatkal ridge of Western Tien Shan Mountains in Uzbekistan, is presented as a novel species based on morphological details and multi-locus phylogenetic analyses. Phylogenetic relationships of the novel species were established by analyzing the combined sequence data of LSU, ITS, SSU and tef1-α in Maximum parsimony, Maximum likelihood and Bayesian inference analyses. Leptosphaeria chatkalica is characterized by perithecial ascomata, club-like pedicel asci and yellowish-brown, 3-septate, fusiform ascospores with a mucilaginous sheath. A comprehensive characterization and micro-graphs, together with a comparison with other Leptosphaeria species are given.
References
<p>Ariyawansa, H.A., Phukhamsakda, C., Thambugala, K.M., Bulgakov, T.M., Wanasinghe, D.N., Perera, R.H., Mapook, A., Camporesi, E., Kang, J.C., Jones, E.B.G., Bahkali, A.H., Jayasiri, S.C., Hyde, K.D., Liu, Z.Y. & Bhat, J.D. (2015) Revision and phylogeny of <em>Leptosphaeriaceae</em>. <em>Fungal Diversity </em>74: 19–51. https://doi.org/10.1007/s13225-015-0349-2</p>
<p>Barr, M.E. (1987) New taxa and combinations in the Loculoascomycetes. <em>Mycotaxon</em> 29: 501–505.</p>
<p>Boerema, G.H., Gruyter, J. & Kesteren, H.A. (1994) Contributions towards a monograph of <em>Phoma</em> (Coelomycetes)–III-1. Section <em>Plenodomus</em>: Taxa often with a <em>Leptosphaeria</em> teleomorph. <em>Persoonia </em>15: 431–487. https://repository.naturalis.nl/pub/531953</p>
<p>CABI (2019) <em>Leptosphaeria maculans</em> (stem canker). Distribution Maps of Plant Diseases. Wallingford, UK: CAB International. Available from: https://www.cabi.org/isc/datasheet/31468 (accessed 14 April 2021)</p>
<p>Cesati, V. & De Notaris, G. (1863) Schema di classificazione degle sferiacei italici aschigeri piu’ o meno appartenenti al genere sphaerianell’antico significato attribuitoglide persono. <em>Commentario della Società Crittogamologica Italiana</em> 1: 177–42 [In Italian].</p>
<p>Cheek, M., Lughadha, E.N., Kirk, P., Lindon, H., Carretero, J., Looney, B., Douglas, B<em>., </em>Haeewaters, D., Gaya, E., Lllewellyn, T., Ainsworth, A.M., Gafforov, Y., Hyde, K.D., Crous, P., Hughes, M., Walker, B.E., Forzza, R.C., Wong, K.M. & Niskanen, T. (2020) New discoveries: plants and fungi. <em>Plants People Planet</em> 2: 371–388. https://doi.org/10.1002/ppp3.10148</p>
<p>Crane, J.L. & Shearer, C.A. (1991) A Nomenclator of <em>Leptosphaeria</em> V. Cesati & G. De Notaris (Mycota-Ascomycotina-<br>Loculoascomycetes). <em>Illinois Natural History Survey Bulletin </em>34: 195–355. https://doi.org/10.21900/j.inhs.v34.133</p>
<p>Dayarathne, M.C., Phookamsak, R., Ariyawansa, H., Jones, E., Camporesi, E. & Hyde, K. (2015) Phylogenetic and morphological appraisal of <em>Leptosphaeria italica sp. nov.</em> (<em>Leptosphaeriaceae</em>, <em>Pleosporales</em>) from Italy. <em>Mycosphere </em>6: 634–642. https://doi.org/10.5943/mycosphere/6/5/13</p>
<p>De Gruyter, J., Woudenberg, J.H., Aveskamp, M.M., Verkley, G.J., Groenewald, J.Z. & Crous, P.W. (2013) Redisposition of phoma-like anamorphs in <em>Pleosporales</em>. <em>Studies in Mycology </em>75: 1–36. https://doi.org/10.3114/sim0004.</p>
<p>Drummond, A., Suchard, M.A., Xie, D. & Rambaut, A. (2012) Bayesian phylogenetics with BEAUti and the BEAST 1.7. <em>Molecular Biology and Evolution</em> 22: 1185–1192. https://doi.org/10.1093/molbev/mss075</p>
<p>Gafforov, Y. (2017) A preliminary checklist of ascomycetous microfungi from Southern Uzbekistan. <em>Mycosphere</em> 8: 660–696. https://doi.org/10.5943/mycosphere/8/4/12</p>
<p>Gafforov, Y. & Rakhimov, D. (2017) <em>Diplodia</em> and <em>Dothiorella</em> species (<em>Botryosphaeriaceae</em>: <em>Ascomycota</em>) from Uzbekistan. <em>Journal of the Botanical Research Institute of Texas</em> 11: 455–467. https://www.jstor.org/stable/44858877</p>
<p>Gafforov, Y., Ordynets, A., Langer, E., Yarasheva, M., De Mello, G.A., Schigel, D., Pecoraro, L., Zhou, Y., Cai, L. & Zhou, L.W. (2020) Species diversity with comprehensive annotations of wood-inhabiting poroid and corticioid fungi in Uzbekistan. <em>Frontiers in Microbiology</em> 11: 1–35. https://doi.org/10.3389/fmicb.2020.598321</p>
<p>Greuter, W., Burdet., H.M., Chaloner, W.G., Demoulin, V., Grolle<em>, </em>R., Hawksworth, D.H., Nicolson, D.H., Silva, P.C., Stafleu, F.A., Voss, E.G. & McNeill, J. (1988)<em> International code of botanical nomenclature adopted by the Fourteenth International Botanical Congress, Berlin.</em> July-August 1987. Koeltz Scientific Books. Konigstein. Germany (Regnum Vegetabile Vol. 118). 328 pp.</p>
<p>Gulyamova, M.G., Kuchmi, N.P., Ramazanova, S.S., Sagdullaeva, M.S.H. & Kirgizbaeva, K.H.M. (1990) <em>Fungal Flora of Uzbekistan.vol. 7. Ascomycete fungi</em>. Fan Publishing House, Tashkent, pp. 1–196. [In Russian]</p>
<p>Hall, T.A. (1999) BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. <em>Nucleic Acids Symposium Series </em>41: 95–98.</p>
<p>Hillis, D.M & Bull, J.J. (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. <em>Systematic Biology </em>42: 182–192. https://doi.org/10.1093/sysbio/42.2.182</p>
<p>Hongsanan, S., Hyde, K.D., Phookamsak, R., Wanasinghe, D.N., Mckenzie, E.H.C., Sarma, V.V., Boonmee, S., Lücking, R., Bhat, D.J., Liu, N.G., Tennakoon, D.S., Pem, D., Karunarathna, A., Jiang, S.H., Jones, E.B.G., Phillips, A.J.L., Manawasinghe, I.S., Tibpromma, S., Jayasiri, S.C., Sandamali, D.S., Jayawardena, R.S., Wijayawardene, N.N., Ekanayaka, A.H., Jeewon, R., Lu, Y.Z., Dissanayake, A.J., Zeng, X.Y., Luo, Z.L., Tian, Q., Phukhamsakda, C., Thambugala, K.M., Dai, D.Q., Chethana, K.W.T., Samarakoon, M.C., Ertz, D., Bao, D.F., Doilom, M., Liu, J.K., Pérez-Ortega, S., Suija, A., Senwanna, C., Wijesinghe, S.N., Konta, S., Niranjan, M, Zhang, S.N., Ariyawansa, H.A., Jiang, H.B., Zhang, J.F., Norphanphoun, C., De Silva, N.I., Thiyagaraja, V., Zhang, H., Bezerra, J.D.P., Miranda-González, R., Aptroot, A., Kashiwadani, H., Harishchandra, D., Sérusiaux, E., Aluthmuhandiram, J.V.S., Abeywickrama, P.D., Devadatha, B., Wu, H.X., Moon, K.H., Gueidan, C., Schumm, F., Bundhun, D., Mapook, A., Monkai, J., Chomnunti, P., Suetrong, S., Chaiwan, N., Dayarathne, M.C., Yang, J., Rathnayaka, A.R., Bhunjun, C.S., Xu, J.C., Zheng, J.S., Liu, G., Feng, Y. & Xie, N. (2020) Refined families of <em>Dothideomycetes</em>: <em>Dothideomycetidae</em> and <em>Pleosporomycetidae</em>. <em>Mycosphere </em>11: 1553–2107. https://doi.org/10.5943/mycosphere/11/1/13</p>
<p>Howlett, B.J., Idnurm, A., Soledade, M. & Pedras, C. (2001) <em>Leptosphaeria maculans</em>, the causal agent of blackleg disease of Brassicas. <em>Fungal Genetics and Biology</em> 33: 1–14. https://doi.org/10.1006/fgbi.2001.1274</p>
<p>Hu, D.M., Liu, F. & Cai, L. (2013) Biodiversity of aquatic fungi in China. <em>Mycology </em>4: 125–168. https://doi.org/10.1080/21501203.2013.835752</p>
<p>Hyde, K.D., McKenzie, E.H.C. & Koko, T.W. (2011) Towards incorporating anamorphic fungi in a natural classification – checklist and notes for 2010. <em>Mycosphere</em> 2: 1–88. https://doi.org/10.5943/mycosphere/3/2/5</p>
<p>Hyde, K.D., Jones, E.B.G., Liu, J.K., Ariyawansa, H., Boehm, E., Boonmee, S., Braun, U., Chomnunti, P., Crous, P.W., Dai, D.Q., Diederich, P., Dissanayake, A., Doilom, W., Doveri, F., Hongsanan, S., Jayawardena, R., Lawrey, J.D., Li, Y.M., Liu, Y.X., Lücking, R., Monkai, J., Muggia, L., Nelsen, M.P., Pang, K.L., Phookamsak, R., Senanayake, I.C., Shearer, C.A., Suetrong, S., Tanaka, K., Thambugala, K.M., Wijayawardene, N.N., Wikee, S., Wu, H.X, Zhang, Y., Aguirre-Hudson, B., Alias, S.A., Aptroot, A., Bahkali, A.H., Bezerra, J.L., Bhat, D.J., Camporesi, E., Chukeatirote, E., Gueidan, C., Hawksworth, D.L., Hirayama, K., De Hoog, S., Kang, J.C., Knudsen, K., Li, W.J., Li, X.H., Liu, Z.Y., Mapook, A., McKenzie, E.H.C., Miller, A.N., Mortimer, P.E., Phillips, A.J.L., Raja, H.A., Scheuer, C., Schumm, F., Taylor, J.E., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Wang, Y., Xu, J.C., Yacharoen, S., Yan, J.Y. & Zhang, M. (2013) Families of <em>Dothideomycetes</em>. <em>Fungal Diversity</em> 63: 1–313. https://doi.org/10.1007/s13225-013-0263-4</p>
<p>Hyde, K.D., Hongsanan, S., Jeewon, R., Bhat, J.D., McKenzie, E.H.C., Jones, E.B.G., Phookamsak, R., Ariyawansa, H.A., Boonmee, S., Zhao, Q., Abdel-Aziz, F.A., Abdel-Wahab, M.A., Banmai, S., Chomnunti, P., Cui, B.K., Daranagama, D.A., Das, K., Dayarathne, M.C., De Silva, N.I., Dissanayake, A.J., Doilom, M., Ekanayaka, A.H., Gibertoni, T.B., Go´es-Neto, A., Huang, S.K., Jayasiri, S.C., Jayawardena, R., Konta, S., Lee, H.B., Li, W.J., Lin, C.G., Liu, J.K., Lu, Y.Z., Luo, Z.L., Manawasinghe, I.S., Manimohan, P., Mapook, A., Niskanen, T., Norphanphoun, C., Papizadeh, M., Perera, R.H., Phukhamsakda, C., Richter, C., de A. Santiago, A.L.C.M., Drechsler-Santos, E.R., Senanayake, I.C. & Tanaka, K. (2016) Fungal diversity notes 367–490: Taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity </em>80: 1–270. https://doi.org/10.1007/s13225-016-0373-x</p>
<p>Hyde, K.D., Tennakoon, D.S., Jeewon, R., Bhat, D.J., Maharachchikumbura, S.S.N., Rossi, W., Leonardi, M., Lee, H.B., Mun, H.Y., Houbraken, J., Nguyen, T.T.T., Jeon, S.J., Frisvad, J.C., Wanasinghe, D.N., Lücking, R., Aptroot, A., Cáceres, M.E.S., Karunarathna, S.C., Hongsanan, S., Phookamsak, R., de Silva, N.I., Thambugala, K.M., Jayawardena, R.S., Senanayake, I.C., Boonmee, S., Chen, J., Luo, Z.L., Phukhamsakda, C., Pereira, O.L., Abreu, V.P., Rosado, A.W.C., Bart, B., Randrianjohany, E., Hofstetter, V., Gibertoni, T.B., Soares, A.M. da S., Plautz, H.L., Sotão, H.M.P., Xavier, W.K.S., Bezerra, J.D.P., de Oliveira, T.G.L., de Souza-Motta, C.M., Magalhães, O.M.C., Bundhun, D., Harishchandra, D., Manawasinghe, I.S., Dong, W., Zhang, S.N., Bao, D.F., Samarakoon, M.C., Pem, D., Karunarathna, A., Lin, C.G., Yang, J., Perera, R.H., Kumar, V., Huang, S.K., Dayarathne, M.C., Ekanayaka, A.H., Jayasiri, S.C., Xiao, Y., Konta, S., Niskanen, T., Liimatainen, K., Dai, Y.C., Ji, X.H., Tian, X.M., Mešić, A., Singh, S.K., Phutthacharoen, K., Cai, L., Sorvongxay, T., Thiyagaraja, V., Norphanphoun, C., Chaiwan, N., Lu, Y.Z., Jiang, H.B., Zhang, J.F., Abeywickrama, P.D., Aluthmuhandiram, J.V.S., Brahmanage, R.S., Zeng, M., Chethana, T., Wei, D., Réblová, M., Fournier, J., Nekvindová, J., do Nascimento Barbosa, R., dos Santos, J.E.F., de Oliveira, N.T., Li, G.J., Ertz, D., Shang, Q.J., Phillips, A.J.L., Kuo, C.H., Camporesi, E., Bulgakov, T.S., Lumyong, S., Jones, E.B.G., Chomnunti, P., Gentekaki, E., Bungartz, F., Zeng, X.Y., Fryar, S., Tkalčec, Z., Liang, J., Li, G., Wen, T.C., Singh, P.N., Gafforov, Y., Promputtha, I., Yasanthika, E., Goonasekara, I.D., Zhao, R.L., Zhao, Q., Kirk, P.M., Liu, J.K., Yan, J.Y., Mortimer, P.E., Xu, J. & Doilom, M. (2019) Fungal diversity notes 1036–1150: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. <em>Fungal Diversity</em> 96: 1–242. https://doi.org/10.1007/s13225-019-00429-2</p>
<p>Hyde, K.D., De Silva, N., Jeewon, R., Bhat, D.J., Phookamsak, R., Doilom, M., Boonmee, S., Jayawardena, R.S., Maharachchikumbura, S.S.N., Senanayake, I.C., Manawasinghe, I.S., Liu, N.G., Abeywickrama, P.D., Chaiwan, N., Karunarathna, A., Pem, D., Lin, C.G., Sysouphanthong, P., Luo, Z.L., Wei, D.P., Wanasinghe, D.N., Norphanphoun, C., Tennakoon, D.S., Samarakoon, M.C., Jayasiri, S.C., Jiang, H.B., Zeng, X.Y., Li, J.F., Wijesinghe, S.N., Devadatha, B., Goonasekara, I.D., Brahmanage, R.S., Yang, E.F., Aluthmuhandiram, J.V.S., Dayarathne, M.C., Marasinghe, D.S., Li, W.J., Dissanayake, L.S., Dong, W., Huanraluek, N., Lumyong, S., Liu, J.K., Karunarathna, S.C., Jones, E.B.G., Al-Sadi, A.M., Xu, J.C., Harishchandra, D. & Sarma, V.V. (2020a) AJOM new records and collections of fungi: 1–100. <em>Asian Journal of Mycology </em>3: 22–294. https://doi.org/10.1007/s13225-020-00439-5</p>
<p>Hyde, K.D., Jeewon, R., Chen, Y., Bhunjun, C.S., Calabon, M.S., Jiang, H.B., Lin, C.G., Norphanphoun, C., Sysouphanthong, P., Pem, D., Tibpromma, S., Zhang, Q., Doilom, M., Jayawardena, R.S., Liu, J.K., Maharachchikumbura, S.S.N., Phukhamsakda, C., Phookamsak, R., Al-Sadi, A.M., Thongklang, N., Wang, Y., Gafforov, Y., Jones, E.B.G. & Lumyong, S. (2020b) The numbers of fungi: is the descriptive curve flattening? <em>Fungal Diversity</em> 103: 219–271. https://doi.org/10.1007/s13225-020-00458-2</p>
<p>Index Fungorum. (2021) Index Fungorum - Registration and e-Publishing. Available from: http://www.indexfungorum.org/Names/IndexFungorumRegister.htm (accessed 17 April 2021)</p>
<p>Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon, R., Jones, E.B.G., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J.J., Lumbsch, H.T., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Moncalvo, J.M., Ghobad-Nejhad, M., Nilsson, H., Pang, K.A., Pereira, O.L., Phillips, A.J.L., Raspé, O., Rollins, A.W., Romero, A.I., Etayo, J., Selçuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, T.C., Boonmee, S., Dai, D.Q., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C., Hongsanan, S., Jayawardena, R.S., Li, W.J., Perera, R.H., Phookamsak, R., de Silva, N.I., Thambugala, K.M., Tian, Q., Wijayawardene, N.N., Zhao, R.L., Zhao, Q., Kang, J.C., Promputtha, I. (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. <em>Fungal Diversity </em>74: 3–18 https://doi.org/10.1007/s13225-015-0351-8</p>
<p>Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. <em>Briefings in Bioinformatics</em> 20: 1160–1166. https://doi.org/10.1093/bib/bbx108</p>
<p>Kirk, P.M., Cannon, P.F., Minter, D.W. & Stalpers, J.A. (2008) <em>Dictionary of the fungi.</em> 10<sup>th</sup> edition. CABI Europe-UK.</p>
<p>Kishino, H. & Hasegawa, M. (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in <em>Hominoidea. Journal of Molecular Evolution </em>29: 170–19. https://doi.org/10.1007/BF02100115</p>
<p>Kuchkarov, B.T. (2018) Sixth National Report of the Republic of Uzbekistan on the conservation of biological diversity. Available from: https://www.cbd.int/doc/nr/nr-06/uz-nr-06-en.pdf (accessed 15 April 2021)</p>
<p>Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., Valentin, F., Wallace, I.M., Wilm, A., Lopez, R., Thompson, J.D., Gibson, T.J. & Higgins, D.G. (2007) Clustal W and Clustal X Version 2.0. <em>Bioinformatics</em> 23: 2947–2948. https://doi.org/10.1093/bioinformatics/btm404</p>
<p>Lioubimtseva, E. & Henebry, G.M. (2009) Climate and environmental change in arid Central Asia: Impacts, vulnerability, and adaptations. <em>Journal of Arid Environments</em> 73: 963–977. https://doi.org/10.1016/j.jaridenv.2009.04.022</p>
<p>Liu, J.K., Hyde, K.D., Jones, E.B.G., Ariyawansa, H.A., Bhat, D.J., Boonmee, B., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Phookamsak, R., Phukhamsakda, C., Shenoy, B.D., Abdel-Wahab, M.A., Buyck, B., Chen, J., Chethana, K.W.T., Singtripop, C., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Dissanayake, A.J., Doilom, M., D’souza, M.J., Fan, X.L., Goonasekara, I.D., Hirayama, K., Hongsanan, S., Jayasiri, S.C., Jayawardena, R.S., Karunarathna, S.C., Li, W.J., Mapook, A., Norphanphoun, C., Pang, K.L., Perera, R.H., Peršoh, D., Pinruan, U., Senanayake, I.C., Somrithipol, S., Suetrong, S., Tanaka, K., Thambugala, K.M., Tian, Q., Tibpromma, S., Udayanga, D., Wijayawardene, N.N., Wanasinghe, D., Wisitrassameewong, K., Zeng, X.Y., Abdel-Aziz, F.A., Adamčík, S., Bahkali, A.H., Boonyuen, N., Bulgakov, T., Callac, P., Chomnunti, P., Greiner, G., Hashimoto, A., Hofstetter, V., Kang, J.C., Lewis, D., Li, X.H., Liu, X.H., Liu, Z.Y., Matsumura, M., Mortimer, P.E., Rambold, G., Randrianjohany, E., Sato, G., Sri-Indrasutdhi, V., Tian, C.M., Verbeken, A., von Brackel, W., Wang, Y., Wen, T.C., Xu, J.C., Yan, J.Y., Zhao, R.L. & Camporesi, E. (2015) Fungal diversity notes 1–110: Taxonomic and phylogenetic contributions to fungal species. <em>Fungal Diversity</em> 72: 1–197. https://doi.org/10.1007/s13225-015-0324-y</p>
<p>Miller, M., Pfeiffer, W.T. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees. <em>In:</em> <em>Proceedings of the Gateway Computing Environments Workshop: 14 Nov 2010.</em> pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129</p>
<p>Mustafayev, I., Beshko, N. & Iminova, M. (2019) Checklist of ascomycetous microfungi of the Nuratau Nature Reserve (Uzbekistan). <em>Novosti sistematiki nizshikh rastenii</em> 53: 315–332. https://doi.org/10.31111/nsnr/2019.53.2.315</p>
<p>Nylander, J.A.A. (2004) <em>MrModeltest 2.0. Program distributed by author.</em> Evolutionary Biology Centre, Uppsala University.</p>
<p>Pem, D., Jeewon, R., Gafforov, Y., Hongsanan, S., Phukhamsakda, C., Promputtha, I., Doilom, M. & Hyde, K.D. (2019) <em>Melanocamarosporioides ugamica</em> gen. et <em>sp. nov.</em>, a novel member of the family <em>Melanommataceae</em> from Uzbekistan. <em>Mycological Progress</em> 18: 471–481. https://doi.org/10.1007/s11557-018-1448-8</p>
<p>Pem, D., Hongsanan, S., Doilom, M., Tibpromma, S., Wanasinghe, D.N., Dong, W., Liu, N.G., Phookamsak, R., Phillips, A.J.L., Jeewon, R. & Hyde, K.D. (2020a) https://www.dothideomycetes.org: An online taxonomic resource for the classification, identification, and nomenclature of <em>Dothideomycetes</em>. <em>Asian Journal of Mycology</em> 3: 287–297. https://doi.org/10.5943/ajom/2/1/19</p>
<p>Pem, D., Jeewon, R., Selcuk, F., Ulukapi, M., Bhat, J., Doilom, M., Lumyong, S. & Hyde, K.D. (2020b) Ribosomal and protein gene phylogeny reveals novel saprobic fungal species from <em>Juglans regia </em>and <em>Urtica dioica</em>. <em>Frontiers in Microbiology </em>11: 1–10. https://doi.org/10.3389/fmicb.2020.01303</p>
<p>Phookamsak, R., Hyde, K.D., Jeewon, R., Bhat, D.J., Jones, E.B.G., Maharachchikumbura, S.S.N., Raspé, O., Karunarathna, S.C., Wanasinghe, D.N., Hongsanan, S., Doilom, M., Tennakoon, D.S., Machado, A.R., Firmino, A.L., Ghosh, A., Karunarathna, A., Mešić, A., Dutta, A.K., Thongbai, B., Devadatha, B., Norphanphoun, C., Senwanna, C., Wei, D., Pem, D., Ackah, F.K., Wang, G.N., Jiang, H.B., Madrid, H., Lee, H.B., Goonasekara, I.D., Manawasinghe, I.S., Kušan, I., Cano, J., Gené, J., Li, J., Das, K., Acharya, K., Raj, K.N.A., Latha, K.P.D., Chethana, K.W.T., He, M.Q., Dueñas, M., Jadan, M., Martín, M.P., Samarakoon, M.C., Dayarathne, M.C., Raza, M. Park, M.S., Telleria, M.T., Chaiwan, N., Matočec, N., De Silva, N.I., Pereira, O.L., Singh, P.N., Manimohan, P., Uniyal, P., Shang, Q.J., Bhatt, R.P., Perera, R.H., Alvarenga, R.L.M., Nogal-Prata, S., Singh, S.K., Vadthanarat, S., Oh, S.Y., Huang, S.K., Rana, S., Konta, S., Paloi, S., Jayasiri, S.C., Jeon, S.J., Mehmood, T.,Gibertoni, T.B., Nguyen, T.T.T., Singh, U., Thiyagaraja, V., Sarma, V.V., Dong, W., Yu, X.D., Lu, Y.Z., Lim, Y.W., Chen, Y., Tkalčec, Z., Zhang, Z.F., Luo, Z.L., Daranagama, D.A., Thambugala, K.M., Tibpromma, S., Camporesi, E., Bulgakov, T.S., Dissanayake, A.J., Senanayake, I.C., Dai, D.Q., Tang, L.Z, Khan, S., Zhang, H., Promputtha, I., Cai, L., Chomnunti, P., Zhao, R.L., Lumyong, S., Boonmee, S., Wen, T.C., Mortimer, P.E. & Xu, J. (2019) Fungal diversity notes 929–1035: Taxonomic and phylogenetic contributions on genera and species of fungi. <em>Fungal Diversity</em> 95: 1–273. https://doi.org/10.1007/s13225-019-00421-w</p>
<p>Phukhamsakda, C., McKenzie, E.H.C., Phillips, A.J.L., Jones, E.B.G., Bhat, D.J., Marc, S., Bhunjun, C.S., Wanasinghe, D.N., Thongbai, B., Camporesi, E., Ertz, D., Jayawardena, R.S., Perera, R.H., Ekanayake, A.H., Tibpromma, S., Doilom, M., Xu, J. & Hyde, K.D. (2020) Microfungi associated with <em>Clematis </em>(<em>Ranunculaceae</em>) with an integrated approach to delimiting species boundaries. <em>Fungal Diversity </em>102: 1–203. https://doi.org/10.1007/s13225-020-00448-4</p>
<p>Pointing, S.B, Parungao, M.M. & Hyde, K.D. (2003) Production of wood-decay enzymes, mass loss and lignin solubilization in wood by tropical <em>Xylariaceae</em>. <em>Mycological Research</em> 107: 231–235. https://doi.org/10.1017/S0953756203007329</p>
<p>Rambaut, A. (2014) FigTree v1.4. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh. Available from: http://tree.bio.ed.ac.uk/software/figtree (accessed 1 October 2020)</p>
<p>Rehner, S. (2001) Primers for elongation factor 1-α (EF1-α). Available from: http://ocid.NACSE.ORG/research/deephyphae/EF1primer.pdf (accessed 1 September 2020)</p>
<p>Rehner, S.A. & Samuels, G.J. (1994) Taxonomy and phylogeny of <em>Gliocladium</em> analysed from nuclear large subunit ribosomal DNA sequences. <em>Mycological Research</em> 98: 625–634. https://doi.org/10.1016/S0953-7562(09)80409-7</p>
<p>Ronquist, F. & Huelsenbeck, J.P. (2003) Mrbayes 3: Bayesian phylogenetic inference under mixed models. <em>Bioinformatics </em>19: 1572–1574. https://doi.org/10.1093/bioinformatics/btg180</p>
<p>Samarakoon, M.C., Gafforov, Y., Liu, N., Maharachchikumbura, S.S.N., Bhat, J.D., Liu, J.K., Promputtha, I. & Hyde, K.D. (2018) Combined multi-gene backbone tree for the genus <em>Coniochaeta</em> with two new species from Uzbekistan. <em>Phytotaxa</em> 336: 43–58. https://doi.org/10.11646/phytotaxa.336.1.3</p>
<p>Senanayake, I.C., Rathnayaka, A.R., Marasinghe, D.S., Calabon, M.S., Gentekaki, E., Lee, H.B., Hurdeal, V.G., Pem, D., Dissanayake, L.S., Wijesinghe, S.N., Bundhun, D., Nguyen, T.T., Goonasekara, I.D., Abeywickrama, P.D., Bhunjun, C.S., Jayawardena, R.S., Wanasinghe, D.N., Jeewon, R., Bhat, D.J. & Xiang, M.M. (2020) Morphological approaches in studying fungi: Collection, examination, isolation, sporulation and preservation. <em>Mycosphere </em>11: 2678–2754. https://doi.org/10.5943/mycosphere/11/1/20</p>
<p>Stamatakis, A. (2014) RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. <em>Bioinformatics </em>30: 1312–1313. https://doi.org/10.1093/bioinformatics/btu033</p>
<p>Sun, J.Z., Liu, X.Z., McKenzie, E.H.C., Jeewon, R., Liu, J.K., Zhang, X.L., Zhao, Q. & Hyde, K.D. (2019) Fungicolous fungi: terminology, diversity, distribution, evolution and species checklist. <em>Fungal Diversity</em> 95: 1–94. https://doi.org/10.1007/s13225-019-00422-9</p>
<p>Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several <em>Cryptococcus </em>species. <em>Journal of Bacteriology</em> 172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990</p>
<p>Wanasinghe, D.N., Camporesi, E. & Hu, D.M. (2016) <em>Neoleptosphaeria jonesii</em> <em>sp. nov.</em>, a novel saprobic sexual species, in <em>Leptosphaeriaceae</em>. <em>Mycosphere</em> 7: 1368–1377. https://doi.org/10.5943/mycosphere/7/9/10</p>
<p>Wanasinghe, D., Phukhamsakda, C., Hyde, K., Jeewon, R., Lee, H.B., Jones, E.B.G., Tibpromma, S., Tennakoon, D.S., Dissanayake, A.J., Jayasiri, S.C., Gafforov, Y., Camporesi, E., Bulgakov, T.S., Ekanayaka, A.H., Perera, R.H., Samarakoon, M.C., Goonasekara, I.D., Mapook, A., Li, W.J., Senanayake, I.C., Li, J., Norphanphoun, C., Doilom, M., Bahkali, A.H., Xu, J., Mortimer, P.E., Tibell, L., Tibell, S. & Karunarathna, S.C. (2018) Fungal diversity notes 709–839: Taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on <em>Rosaceae</em>. <em>Fungal Diversity </em>89: 1–236. https://doi.org/10.1007/s13225-018-0395-7</p>
<p>Wanasinghe, D.N., Wijayawardene, N.N. & Xu, J.C., Cheewangkoon, R. & Mortimer, P.E. (2020) Taxonomic novelties in <em>Magnolia</em>-associated pleosporalean fungi in the Kunming Botanical Gardens Yunnan, China. <em>Plos One</em> 15: e0235855. https://doi.org/10.1371/journal.pone.0235855</p>
<p>White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics in Innis, M.A., Gelfand, D.H., Sninsky, J.J & White, T.J Eds <em>PCR Protocols: A Guide to Methods and Applications. </em>Academic Press. San Diego California pp. 315–322. https://doi.org/10.1016/b978-0-12-372180-8.50042-1</p>
<p>Yuan, H.S., Lu, X., Dai, Y.C., Hyde, K.D., Kan, Y.H., Kušan, I., He, S.H., Liu, N.G., Sarma, V.V., Zhao, C.L., Cui, B.K., Yousaf, N., Sun, G., Liu, S.Y., Wu, F., Lin, C.G., Dayarathne, M.C., Gibertoni, T.B., Conceição, L.B., Garibay-Orijel, R., Villegas-Ríos, M., Salas-Lizana, R., Wei, T.Z., Qiu, J.Z., Yu, Z.F., Phookamsak, R., Zeng, M., Paloi, S., Bao, D.F., Abeywickrama, P.D., Wei, D.P., Yang, J., Manawasinghe, I.S., Harishchandra, D., Brahmanage, R.S., De Silva, N.I., Tennakoon, D.S., Karunarathna, A., Gafforov, Y., Pem, D., Zhang, S.N., De Azevedo Santiago, A.L.C.M., Bezerra, J.D.P., Dima, B., Acharya, K., Alvarez-Manjarrez, J., Bahkali, A.H., Bhatt, V.K., Brandrud, T.E., Bulgakov, T.S., Camporesi, E., Cao, T., Chen, Y.X., Chen, Y.Y., Devadatha, B., Elgorban, A.M., Fan, L.F., Du, X., Gao, L., Gonçalves, C.M., Gusmão, L.F.P., Huanraluek, N., Jadan, M., Jayawardena, R.S., Khalid, A.N., Langer, E., Lima, D.X., De Lima-Júnior, N.C., De Lira, C.R.S., Liu, J.K., Liu, S., Lumyong, S., Luo, Z.L., Matočec, N., Niranjan, M., Oliveira-Filho, J.R.C., Papp, V., Pérez-Pazos, E., Phillips, A.J.L., Qiu, P.L., Ren, Y., Ruiz, R.F.C., Semwal, K.C., Soop, K., De Souza, C.A.F., Souza-Motta, C.M., Sun, L.H., Xie, M. Le, Yao, Y.J., Zhao, Q. & Zhou, L.W. (2020) Fungal diversity notes 1277–1386: Taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 104: 1–266. https://doi.org/10.1007/s13225-020-00461-7</p>
<p>Zhang, X., White, R.P., Demir, E., Jedryczka, M., Lange, R.M, Islam, M., Li, Z.Q., Huang, Y.J., Hall, A.M., Zhou, G<em>.</em>, Wang, Z<em>.</em>, Cai<em>.</em>, X<em>.</em>, Skelsey, P<em>. </em>& Fitt, B<em>.</em>D<em>.</em>L<em>. </em>(2014)<em> Leptosphaeria</em> spp., phoma stem canker and potential spread of <em>L. maculans</em> on oilseed rape crops in China. <em>Plant Pathology</em> 63: 598–612. <strong> </strong>https://doi.org/10.1111/ppa.12146</p>