Skip to main content Skip to main navigation menu Skip to site footer
Responsive image
Issue: Vol. 663 No. 4: 27 Aug. 2024
Type: Article
Published: 2024-08-27
DOI: 10.11646/phytotaxa.663.4.3
Page range: 205-220
Abstract views: 75
PDF downloaded: 1

Three new species of bright-spored myxomycetes from Asia and the second world record of Perichaena maculosa

Central Siberian Botanical Garden, Siberian Branch, Russian Academy of Sciences, 630090 Novosibirsk, Russia
Botanical Garden and Research Institute of the Mongolian Academy of Sciences, 13330, Ulaanbaatar, Mongolia
Plant Protection Research Institute of Mongolia, 17024, Ulaanbaatar, Mongolia
Botanical Garden and Research Institute of the Mongolian Academy of Sciences, 13330, Ulaanbaatar, Mongolia
Institute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, 630090, Novosibirsk, Russia. Novosibirsk State University, 630090, Novosibirsk, Russia.
Central Siberian Botanical Garden, Siberian Branch, Russian Academy of Sciences, 630090 Novosibirsk, Russia
Arcyria Metatrichia myxomycetes new species SEM taxonomy Tubifera Fungi

Abstract

Three new species of myxomycetes are described in the genera Arcyria, Metatrichia and Tubifera. Each species is given a full description, along with details of ecology and distribution. They are compared to morphologically similar species, using both light and scanning electron microscopy. DNA extracted from the 18S nrDNA regions (SSU), confirmed the three new species.

References

  1. Altschul, S., Gish, W., Miller, W., Myers, E. & Lipman, D. (1990) Basic local alignment search tool. Journal of Molecular Biology 215 (3): 403–410. https://doi.org/10.1016/S0022-2836(05)80360-2
  2. Felsenstein, J. (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution 17: 368–376. https://doi.org/10.1007/BF01734359
  3. Feng, Y. & Schnittler, M. (2017) Molecular or morphological species? Myxomycete diversity in a deciduous forest in northeastern Germany. Nova Hedwigia 104 (1–3): 359–380. https://doi.org/10.1127/nova_hedwigia/2016/0326
  4. Fiore-Donno, A-M., Berney, C., Pawlowski, J. & Baldauf, S.L. (2005) Higher-order phylogeny of plasmodial slime molds (Myxogastria) based on elongation factor 1-A and small subunit rRNA gene sequences. Journal of Eukaryotic Microbiology 52 (3): 201–210. https://doi.org/10.1111/j.1550-7408.2005.00032.x
  5. Fiore-Donno, A.M., Nikolaev, S.I., Nelson, M., Pawlowski, J., Cavalier-Smith, T. & Baldauf, S.L. (2010) Deep phylogeny and evolution of slime moulds (Mycetozoa). Protist 161 (1): 55–70. https://doi.org/10.1016/j.protis.2009.05.002
  6. Fiore-Donno, A.M., Clissmann, F., Meyer, M., Schnittler, M. & Cavalier-Smith, T. (2013) Two-gene phylogeny of bright-spored Myxomycetes (slime moulds, superorder Lucisporidia). PLOS ONE 8: e62586. https://doi.org/10.1371/journal.pone.0062586
  7. Garcнa-Cunchillos, I., Zamora, J.C., Ryberg, M. & Lado, C. (2022) Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa). Molecular Phylogenetics and Evolution 177: 107609. https://doi.org/10.1016/j.ympev.2022.107609
  8. Katoh, K. & Standley, D.M. (2013) MAFFT Multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30 (4): 772–780. https://doi.org/10.1093/molbev/mst010
  9. Katoh, K. & Toh, H. (2008) Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9 (4): 286–298. https://doi.org/10.1093/bib/bbn013
  10. Katoh, K., Misawa, K., Kuma, K. & Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059–3066. https://doi.org/10.1093/nar/gkf436
  11. Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018) MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution 35: 1547–1549. https://doi.org/10.1093/molbev/msy096
  12. Lado, C. (2005–2024) An on line nomenclatural information system of Eumycetozoa. Real Jardin Botanico, CSIC. Madrid, Spain. Available from: http://www.nomen.eumycetozoa.com (accessed 5 August 2024)
  13. Leontyev, D.V, Schnittler, M., Moreno, G., Stephenson, S.L., Mitchell, D.W. & Rojas, C. (2014) The genus Alwisia (Myxomycetes) revalidated, with two species new to science. Mycologia 106 (5): 936–948. https://doi.org/10.3852/13-314
  14. Leontyev, D.V., Schnittler, M. & Stephenson, S.L. (2015) A critical revision of the Tubifera ferruginosa complex. Mycologia 107 (5): 959–985. https://doi.org/10.3852/14-271
  15. Leontyev, D.V., Schnittler, M., Stephenson, S.L. & Novozhilov, Yu.K. (2019) Systematic revision of the Tubifera casparyi-T. dictyoderma complex: resurrection of the genus Siphoptychium and introduction of the new genus Thecotubifera. Mycologia 111 (6): 981–997. https://doi.org/10.1080/00275514.2019.1660842
  16. Lloyd, L.J., Leontyev, D.V. & Dagamac, N.H.A. (2019) Three new species of Tubifera from Tasmania and New South Wales. Phytotaxa 414 (5): 240–252. https://doi.org/10.11646/phytotaxa.414.5.2
  17. Nguyen, L.-T., Schmidt, H.A., von Haeseler, A. & Minh, B.Q. (2015) IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution 32 (1): 268–274. https://doi.org/10.1093/molbev/msu300
  18. Rambaut, A. (2018) FigTree v.1.4.4. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 5 August 2024)
  19. Trifinopoulos, J., Nguyen, L.-T., von Haeseler, A. & Minh, B.Q. (2016) W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis. Nucleic Acids Research 44 (W1): 232–235. https://doi.org/10.1093/nar/gkw256
  20. Vlasenko, A.V. & Vlasenko, V.A. (2023) Three new species of myxomycetes from Siberia. Czech Mycology 75 (2): 159–177. https://doi.org/10.33585/cmy.75205
  21. Vlasenko, A.V., Novozhilov, Yu.K., Bondar, A.A. & Vlasenko, V.A. (2023a) Phylogeny of Trichia brunnea and new names in the genus Arcyria (Trichiales, Myxomycetes). Mikologiya i Fitopatologiya 57 (6): 385–393. https://doi.org/10.31857/S0026364823060144
  22. Vlasenko, A.V., Tomoshevich, M.A. & Chelobanov, B.P. (2023b) Vertical distribution of communities of epiphytic Myxomycetes on woody introduced plants in Siberia. Contemporary Problems of Ecology 16 (4): 466–478. https://doi.org/10.1134/S1995425523040121