Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2024-05-23
Page range: 8-22
Abstract views: 79
PDF downloaded: 3

Pseudoplectania mystica (Ascomycota, Pezizales), a new cup fungus with an endophytic habit of a broad range of host plants

College of Plant Protection, South China Agricultural University, Guangzhou 510642, Guangdong, China
Xidian Junior High School, Ningbo 315613, Zhejiang, China
Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China
State Key Laboratory of Applied Microbiology (Southern China), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, Guangdong, China
Department of Public Health Laboratory Sciences, School of Public Health, Hengyang Medical School, University of South China, Hengyang 421001, Hunan, China
State Key Laboratory of Applied Microbiology (Southern China), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, Guangdong, China
College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, Guangdong, China
1 new taxon endophytic fungus phylogeny Sarcosomataceae Fungi

Abstract

A cup fungus producing ascomata on senescing to dead rhizomes of bamboo in East China is described as Pseudoplectania mystica sp. nov. (Ascomycota, Pezizales) based on morphological, ecological and phylogenetic evidence. Some sequences of unidentified endophytic fungi uploaded to the GenBank database by other researchers were also identified as P. mystica in our phylogeny. By checking the original literature of these sequences, P. mystica was further found to act as an endophyte in a broad range of host plants including Aegiceras, Cinnamomum, Dendrobium and Lindera, probably lurking in the tissues of the host plants as invisible mycelium in most cases and only producing visible ascomata following senescence of the host tissues. Such ecology and a combination of all its morphological characteristics make P. mystica recognizable from other known species of Pseudoplectania. This study contributes to the understanding of the species diversity and lifecycle of Pseudoplectania.

References

  1. Alam, B., Lǐ, J., Gě, Q., Khan, M.A., Gōng, J., Mehmood, S., Yuán, Y. & Gǒng, W. (2021) Endophytic fungi: from symbiosis to secondary metabolite communications or vice versa? Frontiers in Plant Science 12: 791033. https://doi.org/10.3389/fpls.2021.791033
  2. Berkeley, M.J. (1875) Notices of North American fungi. Grevillea 3 (28): 145–160. https://doi.org/10.1080/00222937508681018
  3. Cai, Q., Tulloss, R.E., Tang, L.P., Tolgor, B., Zhang, P., Chen, Z.H. & Yang, Z.L. (2014) Multi-locus phylogeny of lethal amanitas: implications for species diversity and historical biogeography. BMC Evolutionary Biology 14: 143. https://doi.org/10.1186/1471-2148-14-143
  4. Calonge, F.D. & Mata, M. (2002) Plectania carranzae sp. nov. (Ascomycotina) from Costa Rica. Mycotaxon 81: 237–241.
  5. Carbone, M. (2013) A type study of Pseudoplectania stygia (Pezizales). Ascomycete.org 5 (1): 33–38. https://doi.org/10.25664/art-0078
  6. Carbone, M., Agnello, C. & Alvarado, P. (2013) Phylogenetic studies in the family Sarcosomataceae (Ascomycota, Pezizales). Ascomycete.org 5 (1): 1–12. https://doi.org/10.25664/art-0075
  7. Carbone, M., Agnello, C. & Alvarado, P. (2014) Phylogenetic and morphological studies in the genus Pseudoplectania (Ascomycota, Pezizales). Ascomycete.org 6 (1): 17–33. https://doi.org/10.25664/art-0095
  8. Chen, C., Wu, Y., Li, J., Wang, X., Zeng, Z., Xu, J., Liu, Y., Feng, J., Chen, H., He, Y. & Xia, R. (2023) TBtools-II: a “One for all, all for one” bioinformatics platform for biological big-data mining. Molecular Plant 16 (11): 1733–1742. https://doi.org/10.1016/j.molp.2023.09.010
  9. Chinese Academy of Sciences, Ministry of Ecology and Environment of the People’s Republic of China. (2018) Redlist of China’s biodiversity—Basidiomycetes (in Chinese), Announcement No. 10 [2018] of the Ministry of Ecology and Environment, P.R.C. Available from: https://www.mee.gov.cn/xxgk2018/xxgk/xxgk01/201805/t20180524_629586.html/ (accessed: 14 February 2024).
  10. Donadini, J.C. (1987) Étude des Sarcoscyphaceae ss. Le Gal (1). Sarcosomataceae et Sarcoscyphaceae ss. Korf. Le genre Pseudoplectania emend. nov. P. ericae sp. nov. (Pezizales). Mycologia Helvetica 2 (2): 217–246.
  11. Edler, D., Klein, J., Antonelli, A. & Silvestro, D. (2020) raxmlGUI 2.0: a graphical interface and toolkit for phylogenetic analyses using RAxML. Methods in Ecology and Evolution 12 (2): 373–377. https://doi.org/10.1111/2041-210X.13512
  12. Evangelisti, E. (2019) A French collection of Pseudoplectania nigrella (Sarcosomataceae, Pezizales) is closely related to endophytic fungi. Ascomycete.org 11 (6): 285–290. https://doi.org/10.25664/art-0285
  13. Fan, L.-L., Guo, S.-Y. & Han, L.-F. (2018) Diversity of endolichenic fungi associated with some species of Cladonia from the Greater Khingan Mountains of Northeast China. Mycosystema 37 (7): 896–906. https://doi.org/10.13346/j.mycosystema.180071
  14. Favre, J. (1948) Les associations fongiques des hauts-marais jurassiens et de quelques régions voisines. Beiträge zur Kryptogamenflora der Schweiz 10 (3): 1–228.
  15. Fries, E.M. (1822) Systema mycologicum: sistens fungorum ordines, genera et species, huc usque cognitas, quas ad normam methodi naturalis determinavit. Vol. II Sect. 1. Ex Officina Berlingiana, Lundae, 60 pp. https://doi.org/10.5962/bhl.title.5378
  16. Fuckel, L. (1870) Symbolae mycologicae. Beiträge zur kenntniss der rheinischen pilze. Jahrbücher des Nassauischen Vereins für Naturkunde 23–24: 1–459. https://doi.org/10.5962/bhl.title.47117
  17. Gardes, M. & Bruns, T.D. (1993) ITS primers with enhanced specificity for Basidiomycetes—Application to identification of mycorrhizae and rusts. Molecular Ecology 2 (2): 113–118. https://doi.org/10.1111/j.1365-294x.1993.tb00005.x
  18. Glejdura, S., Kučera, V., Lizoň, P. & Kunca, V. (2015) Pseudoplectania lignicola sp. nov. described from central Europe. Mycotaxon 130 (1): 1–10. https://doi.org/10.5248/130.1
  19. Healy, R.A., Arnold, A.E., Bonito, G., Huang, Y.L., Lemmond, B., Pfister, D.H. & Smith, M.E. (2022) Endophytism and endolichenism in Pezizomycetes: the exception or the rule? New Phytologist 233 (5): 1974–1983. https://doi.org/10.1111/nph.17886
  20. Hirooka, Y., Masuya, H., Akiba, M. & Kubono, T. (2013) Sydowia japonica, a new name for Leptosphaerulina japonica based on morphological and molecular data. Mycological Progress 12 (2): 173–183. https://doi.org/10.1007/s11557-012-0823-0
  21. Holec, J. & Kříž, M. (2013) Current occurrence of Pseudoplectania melaena (Fungi, Ascomycota) in the boubínský prales national nature reserve. Vimperk 19 (2): 73–80.
  22. Index Fungorum Partnership. (2024) Index Fungorum. Available from: https://www.indexfungorum.org/Names/Names.asp/ (accessed: 14 February 2024).
  23. IPNI. (2024) International Plant Names Index, The Royal Botanic Gardens, Kew, Harvard University Herbaria & Libraries and Australian National Herbarium. Available from: https://www.ipni.org/ (accessed: 14 February 2024).
  24. Iturriaga, T., Mardones, M. & Urbina, H. (2012) A new species of Pseudoplectania (Sarcosomataceae, Pezizales) from Venezuela. Kurtziana 37 (1): 73–78.
  25. Kasai, M. (1917) Sclerotia disease on seedlings of Japanese cedar and black spot disease on Japanese cedar. Japanese Journal of Plant Protection 4: 23–28.
  26. Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Molecular Biology and Evolution 30 (4): 772–780. https://doi.org/10.1093/molbev/mst010
  27. Korf, R.P. (1972) Synoptic key to the genera of the Pezizales. Mycologia 64 (5): 937–994. https://doi.org/10.1080/00275514.1972.12019349
  28. Kreisel, H. (1962) Pilze der moore und ufer norddeutschlands, III. Pseudoplectania sphagnophila (Fr. pro var.) Kreisel nov. comb. Westfälische Pilzbriefe 3 (5): 74–77.
  29. Krisai-Greilhuber, I. (2019) Pseudoplectania melaena. The IUCN Red List of Threatened Species 2019: e.T147440561A148048893. Available from: https://www.iucnredlist.org/species/147440561/148048893/ (accessed: 14 February 2024).
  30. Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33 (7): 1870–1874. https://doi.org/10.1093/molbev/msw054
  31. Larsson, A. (2014) AliView: a fast and lightweight alignment viewer and editor for large data sets. Bioinformatics 30 (22): 3276–3278. https://doi.org/10.1093/bioinformatics/btu531
  32. Larsson, A. (2021) AliView. Available from: http://www.ormbunkar.se/aliview/index.html#top (accessed: 14 February 2024).
  33. Li, J.L., Sun, X., Chen, L. & Guo, L.D. (2016) Community structure of endophytic fungi of four mangrove species in Southern China. Mycology 7 (4): 180–190. https://doi.org/10.1080/21501203.2016.1258439
  34. Li, Z., Wang, X., Wang, X., Teng, D., Mao, R., Hao, Y. & Wang, J. (2017) Research advances on plectasin and its derivatives as new potential antimicrobial candidates. Process Biochemistry 56: 62–70. https://doi.org/10.1016/j.procbio.2017.02.006
  35. Lu, J.-R., Yu, F.-M., Zhou, D.-Q., Lu, Z.-Y., Zhang, Y. & Zhao, Q. (2023) Two novel species of Urnula (Sarcosomataceae, Pezizales) from Yunnan, China. Phytotaxa 619 (1): 86–96. https://doi.org/10.11646/phytotaxa.619.1.4
  36. Mougeot, J.B. & Nestler, C.G. (1818) Quas in Rheni superioris inferiorisque, nec non Vogesorum praefecturis collegerunt. Stirpes Voyeso-Rhenanae 6: 501–600.
  37. Mygind, P.H., Fischer, R.L., Schnorr, K.M., Hansen, M.T., Sönksen, C.P., Ludvigsen, S., Raventós, D.S., Buskov, S., Christensen, B.B., Maria, L.D., Taboureau, O., Yaver, D.S., Elvig-Jørgensen, S.G., Sørensen, M.V., Christensen, B.E., Kjærulff, S., Frimodt-Møller, N., Lehrer, R.I., Zasloff, M. & Kristensen, H.H. (2005) Plectasin is a peptide antibiotic with therapeutic potential from a saprophytic fungus. Nature 437 (7061): 975–980. https://doi.org/10.1038/nature04051
  38. NCBI. (2024a) GenBank. Available from: https://www.ncbi.nlm.nih.gov/genbank/ (accessed: 14 February 2024).
  39. NCBI. (2024b) Basic local alignment search tool. Available from: https://blast.ncbi.nlm.nih.gov/Blast.cgi/ (accessed: 14 February 2024).
  40. Persoon, C.H. (1801) Synopsis methodica fungorum. Apud Henricum Dieterich, Gottingae, 706 pp.
  41. Persoon, C.H. (1822) Mycologia Europaea seu Completa omnium fungorum in variis Europaeae regionibus detectorum enumeratio, methodo naturali disposita; descriptione succincta, synonymia selecta et observationibus criticis additis. Impensibus I. I. Palmii, Erlangae, 240 pp.
  42. Puillandre, N., Lambert, A., Brouillet, S. & Achaz, G. (2012) ABGD: automatic barcode gap discovery for primary species delimitation. Molecular Ecology 21 (8): 1864–1877. https://doi.org/10.1111/j.1365-294X.2011.05239.x
  43. Puillandre, N., Brouillet, S. & Achaz, G. (2021) ASAP: assemble species by automatic partitioning. Molecular Ecology Resources 21 (2): 609–620. https://doi.org/10.1111/1755-0998.13281
  44. Puillandre, N., Brouillet, S. & Achaz, G. (2023) ASAP web. Available from: https://bioinfo.mnhn.fr/abi/public/asap/ (accessed: 14 February 2024).
  45. Puillandre, N., Lambert, A., Brouillet, S. & Achaz, G. (2023) ABGD web. Available from: https://bioinfo.mnhn.fr/abi/public/abgd/abgdweb.html/ (accessed: 14 February 2024).
  46. Qadri, M., Rajput, R., Abdin, M.Z., Vishwakarma, R.A. & Riyaz-Ul-Hassan, S. (2014) Diversity, molecular phylogeny, and bioactive potential of fungal endophytes associated with the Himalayan blue pine (Pinus wallichiana). Microbial Ecology 67 (4): 877–887. https://doi.org/10.1007/s00248-014-0379-4
  47. Rambaut, A. (2007) FigTree. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed: 14 February 2024).
  48. Rodriguez, R.J., White, Jr J.F., Arnold, A.E. & Redman, R.S. (2009) Fungal endophytes: diversity and functional roles. New Phytologist 182 (2): 314–330. https://doi.org/10.1111/j.1469-8137.2009.02773.x
  49. Ronquist, F., Teslenko, M., Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) Mrbayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61 (3): 539–542. https://doi.org/10.1093/sysbio/sys029
  50. Saccardo, P.A. (1889) Discomyceteae et Phymatosphaeriaceae. Sylloge Fungorum 8: 165–166. https://doi.org/10.5962/bhl.title.5371
  51. Sanwal, B.D. (1953) Contributions towards our knowledge of the Indian Discomycetes. I. Some new records and new species of operculate Discomycetes. Sydowia 7 (1–4): 191–199.
  52. Schneider, T., Kruse, T., Wimmer, R., Wiedemann, I., Sass, V., Pag, U., Jansen, A., Nielsen, A.K., Mygind, P.H., Raventós, D.S., Neve, S., Ravn, B., Bonvin, A.M., De Maria, L., Andersen, A.S., Gammelgaard, L.K., Sahl, H.G. & Kristensen, H.H. (2010) Plectasin, a fungal defensin, targets the bacterial cell wall precursor lipid II. Science 328 (5982): 1168–1172. https://doi.org/10.1126/science.1185723
  53. Seaver, F.J. (1913) The genus Pseudoplectania. Mycologia 5 (6): 299–302. https://doi.org/10.1080/00275514.1913.12018535
  54. Siebold, P.F. & Zuccarini, J.G. (1843) Plantarum, quas in japonia collegit Dr. PH. FR. de Siebold genera nova, notis characteristics delineationibusque illustrata proponunt. Abhandlungen der Mathematisch-Physikalischen Klasse der Königlich Bayerischen Akademie der Wissenschaften 3 (3): 745. https://doi.org/10.5962/bhl.title.10720
  55. Sochorová, Z., Carbone, M., Sedlářová, M., Polhorský, A. & Sochor, M. (2022) Pseudoplectania africana (Sarcosomataceae, Pezizales), a new species from South Africa. Bothalia 52 (1): a1. https://doi.org/10.38201/btha.abc.v52.i1.1
  56. Tai, F.L. (1979) Sylloge fungorum sinicorum (in Chinese). Science Press, Academia Sinica, Peking, China, 297 pp.
  57. Technelysium (2024) Chromas. Available from: https://technelysium.com.au/wp/chromas (accessed: 14 February 2024).
  58. Tidke, S.A., Kumar KL, R., Ramakrishna, D., Kiran, S., Kosturkova, G. & Gokare, R.A. (2017) Current understanding of endophytes: their relevance, importance, and industrial potentials. IOSR Journal of Biotechnology and Biochemistry 3 (3): 43–59. https://doi.org/10.9790/264X-0303024359
  59. Uzun, Y. & Kaya, A. (2018) Plectania ericae, a new record for Turkey from Sarcosomataceae. Mantar Dergisi 9 (2): 155–157. https://doi.org/10.30708/mantar.425533
  60. Vidal, J.M., Cseh, P., Merényi, Z., Bóna, L., Rudnóy, S., Bratek, Z., Paz, A., Mleczko, P., Kozak, M., Chachuła, P., Assyov, B., Slavova, M., Kaounas, V., Konstantinidis, G., Rodríguez, F., Cabero, J., García-Verdugo, F., García-Alonso, F., Mahiques, R., Fantini, P. & States, J.S. (2023) The genus Gautieria (Gomphales) in Europe and the Mediterranean Basin: a morphological and phylogenetic taxonomic revision. Persoonia 50: 48–122. https://doi.org/10.3767/persoonia.2023.50.03
  61. Vilgalys Mycology Lab (2024) Vilgalys Mycology Lab—Duke University. Available from: https://sites.duke.edu/vilgalyslab (accessed: 14 February 2024).
  62. Weber, R.W.S., Stenger, E., Meffert, A. & Hahn, M. (2004) Brefeldin A production by Phoma medicaginis in dead pre-colonized plant tissue: a strategy for habitat conquest? Mycological Research 108 (6): 662–671. https://doi.org/10.1017/S0953756204000243
  63. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenies. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp. 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  64. Wu, X.-H., Li, W.-C. & Qin, L.-P. (2012) Analyses on composition and diversity of endophytic fungi in different parts of Lindera glauca from Tianmu Mountain (in Chinese). Journal of Plant Resources and Environment 21 (2): 107–113.
  65. Xiang, C.-Y., Gao, F., Jakovlić, I., Lei, H.-P., Hu,Y., Zhang, H., Zou, H., Wang, G.‐T. & Zhang, D. (2023) Using PhyloSuite for molecular phylogeny and tree‐based analyses. iMeta 2 (1): e87. https://doi.org/10.1002/imt2.87
  66. Yang, K.L. (2023) Towards a standardized expression system of colors in fungal morphological description: color nomenclatural code for description works of specimens in Kun L. Yang’s private herbarium (HTBM). Zenodo Personal article: 1–5. https://doi.org/10.5281/zenodo.10060481
  67. Yao, H., Sun, X., He, C., Maitra, P., Li, X.C. & Guo, L.D. (2019) Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem. Microbiome 7 (1): 57. https://doi.org/10.1186/s40168-019-0671-0
  68. Zhang, Q. & Zhang, J. (2020) A new species of the genus Pseudoplectania, P. sinica (in Chinese). Mycosystema 39 (8): 1476–1486. https://doi.org/10.13346/j.mycosystema.200020
  69. Zhang, D., Gao, F., Jakovlić, I., Zou, H., Zhang, J., Li, W.X. & Wang, G.T. (2020) PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Molecular Ecology Resources 20 (1): 348–355. https://doi.org/10.1111/1755-0998.13096