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Type: Article
Published: 2024-04-17
Page range: 271-280
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Glomus rugosae, a new arbuscular mycorrhizal species in Glomeraceae (phylum Glomeromycota) from maritime sand dunes of Poland and an ash pond of Czech Republic

Department of Environmental Management, West Pomeranian University of Technology in Szczecin, Słowackiego 17, PL-71434 Szczecin, Poland
Institute of Botany, Faculty of Biology, Jagiellonian University, 30-387, Kraków, Poland
Department of Genetic, Plant Breeding & Biotechnology, West Pomeranian University of Technology in Szczecin, Słowackiego 17, PL-71434 Szczecin, Poland
Department of Shaping of Environment, West Pomeranian University of Technology in Szczecin, Słowackiego 17, PL-71434 Szczecin, Poland
Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59078-900, Natal, RN, Brazil
Department of Environmental Management, West Pomeranian University of Technology in Szczecin, Słowackiego 17, PL-71434 Szczecin, Poland
Fungi arbuscular mycorrhizal fungi new taxon morphology nuc rDNA phylogenetic taxonomy rpb1

Abstract

Preliminary morphological analyzes of an isolate producing glomoid spores in culture and comparison of its 45S nuc rDNA sequences (= 18S-ITS-28S) with sequences available in GenBank suggested that this isolate is an undescribed arbuscular mycorrhizal fungus of the genus Glomus in the family Glomeraceae (phylum Glomeromycota). This suggestion was confirmed by phylogenetic analyzes with sequences of 45S and the largest subunit of RNA polymerase II (rpb1) gene that placed this isolate in an autonomous clade sister to that with Glomus macrocarpum, the type species of Glomus and Glomeromycota. In the field, this species, here named G. rugosae sp. nov., was associated with roots of Rosa rugosa, which inhabited the coastal dunes of the Hel Peninsula in northern Poland. In single-species cultures, G. rugosae formed typical vesicular-arbuscular mycorrhiza. Phylogenetic analyzes with 45S sequences of Glomus species and environmental sequences with a similarity of >96% to the 45S sequences of G. rugosae showed that G. rugosae was previously detected in the Czech Republic.

References

  1. Abadi, S., Azouri, D., Pupko, T. & Mayrose, I. (2019) Model selection may not be a mandatory step for phylogeny reconstruction. Nature Communications 10: 934. https://doi.org/10.1038/s41467-019-08822-w
  2. Berch, S.M. & Fortin, J.A. (1983) Lectotypification of Glomus macrocarpum and proposal of new combinations: Glomus aus­trale, Glomus versiforme, and Glomus tenebrosum (Endogon­acea­e). Canadian Journal of Botany 61: 2608–2617. https://doi.org/10.1139/b83-287
  3. Berch, S.M. & Fortin, J.A. (1984) Some sporocarpic Endogonaceae from eastern Canada. Canadian Journal of Botany 62: 170–180. https://doi.org/10.1139/b84-029
  4. Błaszkowski, J. (1993) Polish Glomales XII. Glomus macrocarpum Tul. & Tul. and Glomus microcarpum Tul. & Tul. Bulletin Polish Academy Biological Sciences 41: 29–39.
  5. Błaszkowski, J. (1994) Arbuscular fungi and mycorrhizae (Glomales) of the Hel Peninsula, Poland. Mycorrhiza 5: 71–88. https://doi.org/10.1007/s005720050043
  6. Błaszkowski, J. (2012) Glomeromycota. Kraków: W. Szafer Institute of Botany, Polish Academy of Sciences, 303 pp.
  7. Błaszkowski, J., Jobim, K., Niezgoda, P., Meller, E., Malinowski, M., Milczarski, P., Zubek, Sz., Magurno, F., Casieri, L., Bierza, W., Błaszkowski, T., Crossay, T. & Goto, B.T. (2021) New glomeromycotan taxa, Dominikia glomerocarpica sp. nov. and Epigeocarpum crypticum gen. nov. et sp. nov. from Brazil, and Silvaspora gen. nov. from New Caledonia. Frontiers in Microbiology 12: 655910. https://doi.org/10.3389/fmicb.2021.655910
  8. Błaszkowski, J., Kovács, G.M., Gáspár, B.K., Balázs, T.K., Buscot, F. & Ryszka, P. (2012) The arbuscular mycorrhizal Paraglomus majewskii sp. nov. represents a new distinct basal lineage in Paraglomeraceae (Glomeromycota). Mycologia 104: 148–156. https://doi.org/10.3852/10-430
  9. Błaszkowski, J., Kovács, G.M. & Balázs, T. (2009) Glomus perpusillum, a new arbuscular mycorrhizal fungus. Mycologia 101: 245–253. https://doi.org/10.3852/08-087
  10. Błaszkowski, J., Renker, C. & Buscot, F. (2006) Glomus drummondii and G. walkeri, two new species of arbuscular mycorrhizal fungi (Glomeromycota). Mycological Research 110: 555–566. https://doi.org/10.1016/j.mycres.2006.02.006
  11. Błaszkowski, J., Sánchez-García, M., Niezgoda, P., Zubek, Sz., Fernández, F., Vila, A., Al-Yahya’ei, M.N., Symanczik, S., Milczarski, P., Malinowski, R., Cabello, M., Goto, B.T., Casieri, L., Malicka, M., Bierza, W. & Magurno, F. (2022) A new order, Entrophosporales, and three new Entrophospora species in Glomeromycota. Frontiers in Microbiology 13: 962856. https://doi.org/10.3389/fmicb.2022.962856
  12. Błaszkowski, J., Yamato, M., Niezgoda, P., Zubek, Sz., Milczarski, P., Malinowski, R., Meller, E., Malicka, M., Goto, B.T., Uszok, S., Casieri, L. & Magurno, F. (2023) A new genus, Complexispora, with two new species, C. multistratosa and C. mediterranea, and Epigeocarpum japonicum sp. nov. Mycological Progress 22: 34. https://doi.org/10.1007/s11557-023-01882-9
  13. Chethana, T.K.W., Manawasinghe, I.S., Hurdeal, V.G., Bhunjun, C.S., Appadoo, M.A., Gentekaki, E., Raspé, O. & Promputtha, I. (2021) What are fungal species and how to delineate them? Fungal Diversity 109: 1–25. https://doi.org/10.1007/s13225-021-00483-9
  14. da Silva, G.A., Corazon‑Guivin, M.A., de Assis, D.M.A. & Oehl, F. (2023) Blaszkowskia, a new genus in Glomeraceae. Mycological Progress 22: 74. https://doi.org/10.1007/s11557-023-01919-z
  15. da Silva, K.J.G., Fernandes, J.A.L., Magurno, F., Leandro, L.B.A., Goto, B.T. & Theodoro, R.C. (2022) Phylogenetic review of Acaulospora (Diversisporales, Glomeromycota) and the homoplasic nature of its ornamentations. Journal of Fungi 8: 892. https://doi.org/10.3390/jof8090892
  16. Gerdemann, J.W. & Trappe, J.M. (1974) The Endogonaceae in the Pacific Northwest. Mycologia Memoir 5: 1–76.
  17. Goto, B.T. & Maia, L.C. (2006) Glomerospores: a new denomination for the spore of Glomeromycota, a group molecularly distinct from the Zygomycota. Mycotaxon 96: 129–132.
  18. Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nuclei Acids Symposium Series 41: 95–98.
  19. Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20: 1160–1166. https://doi.org/10.1093/bib/bbx108
  20. Kornerup, A. & Wanscher, J.H. (1983) Methuen handbook of colour, 3rd Edn. Eyre Methuen, London, 252 pp.
  21. Kozlov, A.M., Darriba, D., Flouri, T., Morel, B. & Stamatakis, A. (2019) RAxML-NG: A fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics 35: 4453–4455. https://doi.org/10.1093/bioinformatics/btz305
  22. Krüger, M., Stockinger, H., Krüger, C. & Schüßler, A. (2009) DNA-based level detection of Glomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi. New Phytologist 183: 212–223. https://doi.org/10.1111/j.1469-8137.2009.02835.x
  23. Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES science gateway for inference of large phylogenetic trees. In: IEEE (Org.) Proceedings of the Gateway Computing Environments Workshop. 14 Nov 2010. IEEE, New Orleans, LA, pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129
  24. Morton, J.B. & Redecker, D. (2001) Two families of Glomales, Archaeosporaceae and Paraglomaceae, with two new genera Archaeospora and Paraglomus, based on concordant molecular and morphological characters. Mycologia 93: 181–195. https://doi.org/10.2307/3761615
  25. Oehl, F., da Silva, G.A., Goto, B.T. & Sieverding, E. (2011) Glomeromycota: three new genera and glomoid species reorganized. Mycotaxon 116: 75–120. https://doi.org/10.5248/116.75
  26. Oehl, F., Wiemken, A. & Sieverding, E. (2003) Glomus spinu­liferum, a new ornamented species in the Glomales. Myco­taxon 86: 157–162.
  27. Omar, M.B., Bollan, L. & Heather, W.A. (1979) A permanent mounting medium for fungi. Bulletin of the British Mycological Society 13: 31–32. https://doi.org/10.1016/S0007-1528(79)80038-3
  28. Ronquist, F., Teslenko, M,, van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542. https://doi.org/10.1093/sysbio/sys029
  29. Stockinger, H., Peyret-Guzzon, M., Koegel, S., Bouffaud, M.-L. & Redecker, D. (2014) The Largest Subunit of RNA Polymerase II as a New Marker Gene to Study Assemblages of Arbuscular Mycorrhizal Fungi in the Field. PLoS ONE 9: e107783. https://doi.org/10.1371/journal.pone.0107783
  30. Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Molecular Biology and Evolution 30: 2725–2729. https://doi.org/10.1093/molbev/mst197
  31. Walker, C. (1983) Taxonomic concepts in the Endogonaceae: spore wall characteristics in species descriptions. Mycotaxon 18: 443–455.
  32. Wijayawardene, N.N., Hyde, K.D., Dai, D.Q. & Sánchez-García, M. (2022) Outline of Fungi and fungus-like taxa—2021. Mycosphere 13 (1): 53–453. https://doi.org/10.5943/mycosphere/13/1/2