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Type: Article
Published: 2022-04-08
Page range: 64–72
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Fissuroma bambucicola sp. nov. (Aigialaceae, Pleosporales) from Bamboo in Guizhou, China

College of Agriculture, Guizhou University, Guiyang, Guizhou 550025, P.R. China, School of Ethnic Medicine, Guizhou Minzu University, Guiyang, Guizhou 550025, P.R. China, Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550006, P.R. China
School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China
Institute of Crop Germplasm Resources, Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550025, P.R. China
Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550006, P.R. China
Fungi 1 new taxon Dothideomycetes muti-gene Phylogeny Taxonomy

Abstract

During an investigation of fungi on bamboos in Guizhou Province of China, a new ascomycete inhabiting decaying bamboo is introduced based on morpho-molecular evidence. Morphologically, our new species is characterized by hemispherical ascomata with slit-like ostiole, trabeculate pseudoparaphyses, obclavate to cylindrical asci, and fusiform, hyaline, 1-septate ascospores, surrounded by a distinctive thin sheath, which fit well with Aigialaceae. The phylogenetic analyses based on a combined LSU, ITS, SSU, and TEF1-α sequence data showed that the new collections are affiliated with the genus Fissuroma and can be recognized as a new species Fissuroma bambusicola. The comprehensive description and notes of F. bambusicola are provided.

References

<p>Chomnunti, P., Hongsanan, S., Aguirre-Hudson, B., Tian, Q., Peršohm, D., Dhami, M.K., Alias, A.S., Xu, J.C., Liu, X.Z., Stadler, M. &amp; Hyde, K.D. (2014) The sooty moulds. <em>Fungal Diversity</em> 66 (1): 1–36. https://doi.org/10.1007/s13225-014-0278-5</p>
<p>Dayarathne, M.C., Jones, E.B.G., Maharachchikumbura, S.S.N., Devadatha, B., Sarma, V.V., Khongphinitbunjong, K. &amp; Hyde, K.D. (2020a) Morpho-molecular characterization of microfungi associated with marine based habitats. <em>Mycosphere</em> 11 (1): 1–188. https://doi.org/10.5943/mycosphere/11/1/1</p>
<p>Dissanayake, A.J., Bhunjun, C.S., Maharachchikumbura, S.S.N. &amp; Liu, J.K. (2020) Applied aspects of methods to infer phylogenetic relationships amongst fungi. <em>Mycosphere</em> 11: 2652–2676.&nbsp; https://doi.org/10.5943/mycosphere/11/1/18</p>
<p>Hall, T.A. (2004) BioEdit. Ibis Therapeutics, Carlsbad, CA, 92008, USA. Available from: http://www.mbio.ncsu.edu/BioEdit/bioedit.html (accessed 18 March 2005)</p>
<p>Hongsanan, S., Hyde, K.D., Phookamsak, R., Wanasinghe, D.N., McKenzie, E.H.C., Sarma, V.V., Boonmee, S., Lücking, R., Bhat, D.J., Liu, N.G., Tennakoon, D.S., Pem, D., Karunarathna, A., Jiang, S.H., Jones, E.B.G., Phillips, A.J.L., Manawasinghe, I.S., Tibpromma, S., Jayasiri, S.C., Sandamali, D.S., Jayawardena, R.S., Wijayawardene, N.N., Ekanayaka, A.H., Jeewon, R., Lu, Y.Z, Dissanayake, A.J., Zeng, X.Y., Luo, Z.L., Tian, Q., Phukhamsakda, C., Thambugala, K.M., Dai, D.Q., Chethana, K.W.T., Samarakoon, M.C., Ertz, D., Bao, D.F., Doilom, M., Liu, J.K., Pérez-Ortega, S., Suija, A., Senwanna, C., Wijesinghe, S.N., Konta, S., Niranjan, M., Zhang, S.N., Ariyawansa, H.A., Jiang, H.B., Zhang, J.F., Norphanphoun, C., de Silva, N.I., Thiyagaraja, V., Zhang, H., Bezerra, J.D.P., Miranda-González, R., Aptroot, A., Kashiwadani, H., Harishchandra, D., Sérusiaux, E., Aluthmuhandiram, J.V.S., Abeywickrama, P.D., Devadatha, B., Wu, H.X., Moon, K.H., Gueidan, C., Schumm, F., Bundhun, D., Mapook, A., Monkai, J., Chomnunti, P., Suetrong, S., Chaiwan, N., Dayarathne, M.C., Yang, J., Rathnayaka, A.R., Bhunjun, C.S., Xu, J.C., Zheng, J.S., Liu, G., Feng, Y. &amp; Xie, N. (2020a) Refined families of Dothideomycetes: Dothideomycetidae and Pleosporomycetidae. <em>Mycosphere</em> 11: 1553–2107. https://doi.org/10.5943/mycosphere/11/1/13</p>
<p>Huelsenbeck, J.P &amp; Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. <em>Bioinformatics</em> 17 (8): 754–755.&nbsp; https://doi.org/10.1093/bioinformatics/17.8.754</p>
<p>Hino, I. &amp; Katumoto, K. (1955) Illustrationes fungorum bambusicolorum III. <em>Bulletin of the Faculty of Agriculture Yamaguchi University</em> 6: 29–68. https://doi.org/10.1038/nature02850</p>
<p>Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, D.J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon, R., Jones, E.B.G., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J.J., Lumbsch, H.T., Maharachchikumbura, S.S.N., McKenzie, E.H.C., Moncalvo, J.M., Ghobad-Nejhad, M., Nilsson, H., Pang, K., Pereira, O.L., Phillips, A.J.L., Raspé, O., Rollins, A.W., Romero, A.I., Etayo, J., Selçuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, T.C., Boonmee, S., Dai, D.Q., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C., Hongsanan, S., Jayawardena, R.S., Li, W.J., Perera, R.H., Phookamsak, R., De Silva, N.I., Thambugala, K.M., Tian, Q., Wijayawardene, N.N., Zhao, R.L., Zhao, Q., Kang, J.C. &amp; Promputtha, I. (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. <em>Fungal Diversity</em> 74: 3–18.&nbsp; https://doi.org/10.1007/s13225-015-0351-8</p>
<p>Katoh, K. &amp; Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. <em>Molecular Biology and Evolution </em>30: 772–780. https://doi.org/10.1093/molbev/mst010</p>
<p>Konta, S., Hyde, K.D., Eungwanichayapant, P.D., Doilom, M., Tennakoon, D., Senwanna, C. &amp; Boonmee, S. (2020) <em>Fissuroma</em> (<em>Aigialaceae</em>: Pleosporales) appears to be hyperdiverse on <em>Arecaceae</em>: evidence from two new species from southern Thailand. <em>Acta Botanica Brasilica</em> 34: 384–393. https://doi.org/10.1590/0102-33062020abb0021</p>
<p>Liu, J.K., Chomnunti, P., Cai, L., Phookamsak, R., Chukeatirote, E., Jones, E.B.G., Moslem, M. &amp; Hyde, K.D. (2010) Phylogeny and morphology of <em>Neodeightonia palmicola</em> <em>sp. nov.</em> from palms. <em>Sydowia</em> 62 (2): 261–276.&nbsp; https://doi.org/10.1016/j.riam.2010.07.001</p>
<p>Liu, J.K., Phookamsak, R., Jones, E.B.G., Zhang, Y., Ko-Ko, T. W., Hu, H.L., Boonmee, S., Doilom, M., Chukeatirote, E., Bahkali, A.H.B., Wang, Y. &amp; Hyde, K.D. (2011) <em>Astrosphaeriella</em> is polyphyletic, with species in <em>Fissuroma</em> <em>gen. nov</em>., and <em>Neoastrosphaeriella</em> <em>gen. nov</em>.. <em>Fungal Diversity</em> 51 (1): 135–154. https://doi.org/10.1007/s13225-011-0142-9</p>
<p>Niranjan, M. &amp; Sarma, V.V. (2018) New Ascomycetous fungi in the family <em>Aigialaceae</em> from Andaman Islands, India. <em>Current Research in Environmental &amp; Applied Mycology</em> 8: 351–359.&nbsp; https://doi.org/10.5943/cream/8/3/6</p>
<p>Nylander, J.A.A. (2004) <em>MrModeltest</em> v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.</p>
<p>Phookamsak, R., Norphanphoun, C., Tanaka, K., Dai, D.Q., Luo, Z.L., Liu, J.K., Su, H.Y., Bhat, D.J., Bahkali, A.H., Mortimer, P.E., Xu, J.C. &amp; Hyde KD. (2015) Towards a natural classification of <em>Astrosphaeriella</em> -like species; introducing <em>Astrosphaeriellaceae</em> and <em>Pseudoastrosphaeriellaceae</em> <em>fam. nov.</em> and <em>Astrosphaeriellopsis</em>, <em>gen. nov</em>.. <em>Fungal Diversity</em> 74 (1): 143–197. https://doi.org/10.1007/s13225-015-0352-7</p>
<p>Rambaut, A. (2012) <em>FigTree</em>, version 1.4. 2. University of Edinburgh, Edinburgh, 2012.</p>
<p>Rehner, S.A. (2001) Primers for elongation factor 1-alpha (EF1-alpha) [http://ocid.nacse.org/research/deephyphae/EF1primer.pdf]</p>
<p>Silvestro, D. &amp; Michalak, I. (2012) raxmlGUI: a graphical front-end for RAxML. <em>Organisms Diversity &amp; Evolution</em> 12: 335–337.</p>
<p>Suetrong, S., Schoch, C.L., Spatafora, J.W., Kohlmeyer, J., Volkmann-Kohlmeyer, B., Sakayaroj, J., Phongpaichit, S., Tanaka, K., Hirayama, K. &amp; Jones, E.B.G. (2009) Molecular systematics of the marine Dothideomycetes. <em>Studies in Mycology</em> 64: 155–173. https://doi.org/10.3114/sim.2009.64.09</p>
<p>Tanaka, K. &amp; Harada, Y. (2005) Bambusicolous fungi in Japan (4): A new combination, <em>Astrosphaeriella aggregata</em>. <em>Mycoscience</em> 46 (2): 114–118.&nbsp; https://doi.org/10.1007/s10267-004-0223-7</p>
<p>Tanaka, K., Hirayama, K., Yonezawa, H., Hatakeyama, S., Harada,Y., Sano1, T., Shirouzu, T. &amp; Hosoya, T. (2009) Molecular taxonomy of bambusicolous fungi: <em>Tetraplosphaeriaceae</em>, a new pleosporalean family with Tetraploa-like anamorphs. <em>Studies in Mycology</em> 64: 175–209.&nbsp; https://doi.org/10.3114/sim.2009.64.10</p>
<p>Tennakoon, D.S., Hyde, K.D., Wanasinghe, D.N., Bahkali, A.H., Camporesi, E., Khan, S. &amp; Phookamsak, R. (2016) Taxonomy and phylogenetic appraisal of <em>Montagnula jonesii</em> <em>sp. nov.</em> (<em>Didymosphaeriaceae</em>, Pleosporales). <em>Mycosphere</em> 7 (9): 1346–1356.&nbsp; https://doi.org/10.5943/mycosphere/7/9/8</p>
<p>Vilgalys, R. &amp; Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several <em>Cryptococcus</em> species. <em>Journal of Bacteriology</em> 172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990</p>
<p>Vohník, M., Borovec, O., Kolaříková, Z., Sudová, R. &amp; Réblová, M. (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et <em>sp. nov.</em> (<em>Aigialaceae</em>, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass <em>Posidonia oceanica</em>. <em>MycoKeys</em> 55: 59–86.&nbsp; https://doi.org/10.3897/mycokeys.55.35682</p>
<p>White, T.J., Bruns, T.D., Lee, S.B. &amp; Taylor, J.W. (1990) Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics. <em>In</em>: Innis, M.A., Gelfand, D.H., Sninsky, J.J. &amp; White, T.J. (Eds.) <em>PCR Protocols</em>:<em> A Guide to Methods and Applications. </em>Academic Press, New York, pp. 315–322.&nbsp; https://doi.org/10.1016/B978-0-12-372180-8.50042-1</p>
<p>Wanasinghe, D.N., Jeewon, R., Gareth, J.E.B., Boonmee, S., Kaewchai, S., Manawasinghe, I.S., Lumyong, S. &amp; Hyde, K.D. (2018) Novel palmicolous taxa within Pleosporales: multigene phylogeny and taxonomic circumscription. <em>Mycological Progress</em> 17 (5): 571–590. https://doi.org/10.1007/s11557-018-1379-4</p>
<p>Wijayawardene, N.N., Hyde, K.D., Rajeshkumar, K.C., Hawksworth, D.L., Madrid, H., Kirk, P.M., Braun, U., Singh, R.V., Crous, P.W., Kukwa, M., Lücking, R., Kurtzman, C.P., Yurkov, A., Haelewaters, D., Aptroot, A., Lumbsch, H.T., Timdal, E., Ertz, D., Etayo, J., Phillips, A.J.L., Groenewald, J.Z., Papizadeh, M., Selbmann, L., Dayarathne, M.C., Weerakoon, G., Jones, E.B.G., Suetrong, S., Tian, Q., Castañeda-Ruiz, R.F., Bahkali, A.H., Pang, K.-L., Tanaka, K., Dai, D.Q., Sakayaroj, J. Hujslová, M., Lombard, L., Shenoy, B.D., Suija, A., Maharachchikumbura, S.S.N., Thambugala, K.M., Wanasinghe, D.N., Sharma, B.O., Gaikwad, S., Pandit, G., Zucconi, L., Onofri, S., Egidi, E., Raja, H.A., Kodsueb, R., Cáceres, M.E.S., Pérez-Ortega, S., Fiuza, P.O., Monteiro, J.S., Vasilyeva, L.N., Shivas, R.G., Prieto, M., Wedin, M., Olariaga, I., Lateef, A.A., Agrawal, Y., Fazeli, S.A.S., Amoozegar, M.A., Zhao, G.Z., Pfliegler, W.P., Sharma, G., Oset, M., Abdel-Wahab, M.A., Takamatsu, S., Bensch, K., de Silva, N.I., De Kesel, A., Karunarathna, A., Boonmee, S., Pfister, D.H., Lu, Y.-Z., Luo, Z.-L., Boonyuen, N., Daranagama, D.A., Senanayake, I.C., Jayasiri, S.C., Samarakoon, M.C., Zeng, X.Y., Doilom, M., Quijada, L., Rampadarath, S., Heredia, G., Dissanayake, A.J., Jayawardana, R.S., Perera, R.H., Tang, L.Z., Phukhamsakda, C., Hernández-Restrepo, M., Ma, X., T., Saowaluck, G., L.F.P., Weerahewa, D. &amp; Karunarathna, S.C. (2017) Notes for genera: Ascomycota. <em>Fungal diversity</em> 86: 1–594.&nbsp; https://doi.org/10.1007/s13225-017-0386-0</p>
<p>Wijayawardene, N.N., Hyde, K.D., Al-Ani, L.K.T., Tedersoo, L., Haelewaters, D., Rajeshkumar, K.C., Zhao, R.L., Aptroot, A., Leontyev, D.V., Saxena, R.K., Tokarev, Y.S., Dai, D.Q., Letcher, P.M., Stephenson, S.L., Ertz, D., Lumbsch, H.T., Kukwa, M., Issi, I.V., Madrid, H., Phillips, A.J.L., Selbmann, L., Pfliegler, W.P., Horváth, E., Bensch, K., Kirk, P., Kolaříková, Z., Raja, H.A., Radek, R., Papp, V., Dima, B., Ma, J., Malosso, E., Takamatsu, S., Rambold, G., Gannibal, P.B., Triebel, D., Gautam, A.K., Avasthi, S., Suetrong, S., Timdal, E., Fryar, S.C., Delgado, G., Réblová, M., Doilom, M., Dolatabadi, S., Pawłowska, J., Humber, R.A., Kodsueb, R., SánchezCastro, I., Goto, B.T., Silva, D.K.A., De Souza, F.A., Oehl, F., Da Silva, G.A., Silva, I.R., Błaszkowski, J., Jobim, K., Maia, L.C., Barbosa, F.R., Fiuza, P.O., Divakar, P.K., Shenoy, B.D., Castañeda-Ruiz, R.F., Somrithipol, S., Karunarathna, S.C., Tibpromma, S., Mortimer, P.E., Wanasinghe, D.N., Phookamsak, R., Xu, J., Wang, Y., Fenghua, T., Alvarado, P., Li, D.W., Kušan, I., Matočec, N., Maharachchikumbura, S.S.N., Papizadeh, M., Heredia, G., Wartchow, F., Bakhshi, M., Boehm, E., Youssef, N., Hustad, V.P., Lawrey, J.D., Santiago, A.L.C.M.A., Bezerra, J.D.P., Souza-Motta, C.M., Firmino, A.L., Tian, Q., Houbraken, J., Hongsanan, S., Tanaka, K., Dissanayake, A.J., Monteiro, J.S., Grossart, H.P., Suija, A., Weerakoon, G., Etayo, J., Tsurykau, A., Kuhnert, E., Vázquez, V., Mungai, P., Damm, U., Li, Q.R., Zhang, H., Boonmee, S., Lu, Y.Z., Becerra, A.G., Kendrick, B., Brearley, F.Q., Motiejűnaitë, J., Sharma, B., Khare, R., Gaikwad, S., Wijesundara, D.S.A., Tang, L.Z., He, M.Q., Flakus, A., Rodriguez-Flakus, P., Zhurbenko, M.P., McKenzie, E.H.C., Stadler, M., Bhat, D.J., Liu, J.K., Raza, M., Jeewon, R., Nassonova, E.S., Prieto, M., Jayalal, R.G.U., Yurkov, A., Schnittler, M., Shchepin, O.N., Novozhilov, Y.K., Liu, P., Cavender, J.C., Kang, Y., Mohammad, S., Zhang, L.F., Xu, R.F., Li, Y.M., Dayarathne, M.C., Ekanayaka, A.H., Wen, T.C., Deng, C.Y., Lateef, A.A., Pereira, O.L., Navathe, S., Hawksworth, D.L., Fan, X.L., Dissanayake, L.S. &amp; Erdoðdu, M. (2020) Outline of Fungi and fungus-like taxa. <em>Mycosphere</em> 11: 1060–1456.&nbsp; https://doi.org/10.5943/mycosphere/11/1/8</p>
<p>Zhang, S.N., Hyde, K.D., Jones, E.B.G., Cheewangkoon, R. &amp; Liu, J.K. (2020) Additions to <em>Fissuroma</em> and <em>Neoastrosphaeriella</em> (<em>Aigialaceae</em>, Pleosporales) from palms.<em> Mycosphere</em> 11 (1): 269–284. https://doi.org/10.5943/mycosphere/11/1/5</p>
<p>Zhaxybayeva, O. &amp; Gogarten, J.P. (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. <em>BMC genomics</em> 3: 4. https://doi.org/10.1186/1471-2164-3-4</p>