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Type: Article
Published: 2021-08-04
Page range: 129-140
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Amanita submelleialba sp. nov. in section Amanita from northern Thailand

Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China
Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand; Center for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, P.R. China
Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand; Academy of Science, the Royal Society of Thailand, Bangkok, 10300, Thailand
1 new species Amanitaceae Multi-gene Phylogeny Taxonomy

Abstract

Amanita submelleialba sp. nov. in section Amanita, is described from northern Thailand based on both multi-gene phylogenetic analysis and morphological evidences. It is characterized by having small to medium-sized basidiomata; a yellow to yellowish pale pileus covering pyramidal to subconical, white to yellow white volval remnants; globose stipe base covered conical, white to yellow white volval remnants; fugacious subapical annulus; and absent clamps. Multi-gene phylogenetic analyses based on partial nuclear rDNA internal transcribed spacer region (ITS), partial nuclear rDNA larger subunit region (nrLSU), RNA polymerase II second largest subunit (RPB2), partial translation elongation factor 1-alpha (TEF1-α) and beta-tubulin gene (TUB) indicated that A. submelleialba clustered together with A. elata and A. mira, but represented as a distinct lineage from other extant species in section Amanita. The detailed morphological characteristics, line-drawing illustration and comparisons with morphologically similar taxa are provided.

References

<p>Adhikari, R.S. (1999) Studies on Agaricales of Kumaon Himalaya. <em>Indian Phytopathology</em> 52 (3): 302–303.</p>
<p>Ariyawansa, H.A., Hyde, K.D., Jayasiri, S.C., Buyck, B., Chethana, K.W.T., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Jayawardena, R.S., Lücking, R., Ghobad-Nejhad, M., Niskanen, T., Thambugala, K.M., Voigt, K., Zhao, R.L., Li, G.J., Doilom, M., Boonmee, S., Yang, Z.L., Cai, Q., Cui, Y.Y., Bahkali, A.H., Chen, J., Cui, B.K., Chen, J.J., Dayarathne, M.C., Dissanayake, A.J., Ekanayaka, A.H., Hashimoto, A., Hongsanan, S., Jones, E.B.G., Larsson, E., Li, W.J., Li, Q.R., Liu, J.K., Luo, Z.L., Maharachchikumbura, S.S.N., Mapook, A., McKenzie, E.H.C., Norphanphoun, C., Konta, S., Pang, K.L., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Pinruan, U., Randrianjohany, E., Singtripop, C., Tanaka, K., Tian, C.M., Tibpromma, S., Abdel-Wahab, M.A., Wanasinghe, D.N., Wijayawardene, N.N., Zhang, J.F., Zhang, H., Abdel-Aziz, F.A., Wedin, M., Westberg, M., Ammirati, J.F., Bulgakov, T.S., Lima, D.X., Callaghan, T.M., Callac, P., Chang, C.H., Coca, L.F., Dal-Forno, M., Dollhofer, V., Fliegerova´, K., Greiner, K., Griffith, G.W., Ho, H.M., Hofstetter, V., Jeewon, R., Kang, J.C., Wen, T.C., Kirk, P.M., Kytövuori, I., Lawrey, J.D., Xing, J., Li, H., Liu, Z.Y., Liu, X.Z., Liimatainen, K., Lumbsch, H.Y., Matsumura, M., Moncada, B., Nuankaew, S., Parnmen, S., de Azevedo Santiago, A.L.C.M., Sommai, S., Song, Y., de Souza, C.A.F., de Souza-Motta, C.M., Su, H.Y., Suetrong, S., Wang, Y., Fong, W.S., Yuan, H.S., Zhou, L.W., Réblová, M., Fournier, J., Camporesi, E., Luangsa-ard, J.J., Tasanathai, K., Khonsanit, A., Thanakitpipattana, D., Somrithipol, S., Diederich, P., Millanes, A.M., Common, R.S., Stadler, M., Yan, J.Y., Li, X.H., Lee, H.W., Nguyen, T.T.T., Lee, H.B., Battistin, E., Marsico, O., Vizzini, A., Vila, J., Ercole, E., Eberhardt, U., Simonini, G., Wen, H.A., Chen, X.H., Miettinen, O. &amp; Spirin, V. (2015) Fungal diversity notes 111–252<strong>—</strong>taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 75 (1): 27–274. https://doi.org/10.1007/s13225-015-0346-5</p>
<p>Bas, C. (1969) Morphology and subdivision of <em>Amanita</em> and a monograph of its section <em>Lepidella</em>. <em>Persoonia</em> 5: 285–579.</p>
<p>Beeli, M. (1931) Contribution à l’étude de la flore mycologique du Congo. Fungi Goossensiani VIII. Genre <em>Amanita</em> Fr. <em>Bulletin de la Société Royale de Botanique</em> 63: 100–109.</p>
<p>Beeli, M. (1935) <em>Flore iconographique des champignons du Congo</em>. <em>Amanita</em>. Fasc. I. Office de Publicité, Bruxelles, 27 pp.</p>
<p>Bhatt, R.P., Tulloss, R.E., Semwal, K.C., Bhatt, V.K., Moncalvo, J.M. &amp; Stephenson, S.L. (2003) Amanitaceae reported from India. A critically annotated checklist. <em>Mycotaxon</em> 88: 249–270.</p>
<p>Cai, Q., Cui, Y.Y. &amp; Yang, Z.L. (2016) Lethal <em>Amanita</em> species in China<em>. Mycologia</em> 108: 993–1009.&nbsp; https://doi.org/10.3852/16-008</p>
<p>Cai, Q., Tulloss, R.E., Tang, L.P., Tolgor, B., Zhang, P., Chen, Z.H. &amp; Yang, Z.L. (2014) Multi-locus phylogeny of lethal amanitas: Implications for species diversity and historical biogeography. <em>BMC Evolutionary Biology</em> 14 (1): 143. https://doi.org/10.1186/1471-2148-14-143</p>
<p>Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. <em>Molecular Biology and Evolution</em> 17: 540–552.&nbsp; https://doi.org/10.1093/oxfordjournals.molbev.a026334</p>
<p>Coker, W.C. (1917) The <em>Amanitas</em> of the eastern United States. <em>Journal of the Elisha Mitchell Scientific Society</em> 33: 1–88.</p>
<p>Corner, E.J.H. &amp; Bas, C. (1962) The genus <em>Amanita</em> in Singapore and Malaya. <em>Persoonia</em> 2: 241–304.</p>
<p>Cui, Y.Y., Cai, Q., Tang, L.P., Liu, J.W. &amp; Yang, Z.L<em>.</em>&nbsp;(2018) The family Amanitaceae: molecular phylogeny, higher-rank taxonomy and the species in China.&nbsp;<em>Fungal Diversity</em>&nbsp;91:<strong>&nbsp;</strong>5–230.&nbsp; https://doi.org/10.1007/s13225-018-0405-9</p>
<p>Dissanayake, A.J., Bhunjun, C.S., Maharachchikumbura, S.S.N. &amp; Liu, J.K. (2020) Applied aspects of methods to infer phylogenetic relationships amongst fungi. <em>Mycosphere</em> 11: 2652–2676.&nbsp; https://doi.org/10.5943/mycosphere/11/1/18</p>
<p>Earle, F.S. (1909) The genera of North American gill fungi. <em>Bulletin of the New York Botanical Garden</em> 5: 373–451.</p>
<p>Fries, E.M. (1815) <em>Observationes mycologicae</em>. Gerh. Bonnier, Copenhagen, 230 pp. https://doi.org/10.5962/bhl.title.112534</p>
<p>Fries, E.M. (1821) <em>Systema mycologicum I</em>. Sweden, Lundin, 520 pp.</p>
<p>Gardes, M. &amp; Bruns, T.D. (1993) ITS primers with enhanced specificity for basidiomycetes application to the identification of mycorrhizae and rusts. <em>Molecular Ecology</em> 2 (2): 113–118.&nbsp; https://doi.org/10.1111/j.1365-294X.1993.tb00005.x</p>
<p>Gilbert, E.J. (1940) Amanitaceae. Bresadola, <em>Iconographia Mycologica</em> 27 (1): 1–200.</p>
<p>Gilbert, E.J. (1941) Idem 2&amp;3. Bresadola, <em>Iconographia Mycologica</em> 27 (2, 3): 201–427.</p>
<p>Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. <em>Nucleic Acids Symposium Series</em> 41: 95–98.</p>
<p>Hongo, T. (1966) Notes on Japanese larger fungi (18). <em>Journal of Japanese Botany</em> 41 (6): 165–172.</p>
<p>Katoh, K. &amp; Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. <em>Molecular Biology and Evolution</em> 30: 772–780. https://doi.org/10.1093/molbev/mst010</p>
<p>Kim, C.S., Jo, J.W., Kwag, Y.N., Oh, J., Shrestha, B., Sung, G.H. &amp; Han, S.K. (2013) Four newly recorded <em>Amanita</em> species in Korea: <em>Amanita</em> sect. <em>Amanita</em> and sect. <em>Vaginatae</em>. <em>Mycobiology</em> 41 (3): 131–138. https://doi.org/10.5941/MYCO.2013.41.3.131</p>
<p>Kornerup, A. &amp; Wanscher, J.H. (1978) <em>Methuen handbook of colour</em>. Eyre Methuen, London, 243 pp.</p>
<p>Larget, B. &amp; Simon, D.L. (1999) Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. <em>Molecular Biology and Evolution</em> 16: 750–759. https://doi.org/10.1093/oxfordjournals.molbev.a026160</p>
<p>Lee, S.S. (2017) <em>A field guide to the larger fungi of FRIM</em>. Forest Research Institute Malaysia, Selangor Darul Ehsan, 174 pp.</p>
<p>Li, G.J., Hyde, K.D., Zhao, R.L., Hongsanan, S., Abdel-Aziz, F.A., AbdelWahab, M.A., Alvarado, P., Alves-Silva, G., Ammirati, S.F., Ariyawansa, H.A., Baghela, A., Bahkali, A.H., Beug, M., Bhat, D.J., Bojantchev, D., Boonpratuang, T., Bulgakov, T.S., Camporesi, E., Boro, M.C., Ceska, O., Chakraborty, D., Chen, J.J., Chethana, K.W.T., Chomnunti, P., Consiglio, G., Cui, B.K., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Das, K., Dayarathne, M.C., De Crop, E., De Oliveira, R.J.V., de Souza, C.A.F., de Souza, J.I., Dentinger, B.T.M., Dissanayake, A.J., Doilom, M., Drechsler-Santos, E.R., Ghobad-Nejhad, M., Gilmore, S.P., Góes-Neto, A., Gorczak, M., Haitjema, C.H., Hapuarachchi, K.K., Hashimoto, A., He, M.Q., Henske, J.K., Hirayama, K., Iribarren, M.J., Jayasiri, S.C., Jayawardena, R.S., Jeon, S.J., Jeroônimo, G.H., Jesus, A.L., Jones, E.B.G, Kang, J.C., Karunarathna, S.C., Kirk, P.M., Konta, S, Kuhnert, E., Langer, E., Lee, H.S., Lee, H.B., Li, W.J., Li, X.H., Liimatainen, K., Lima, D.X., Lin, C.G., Liu, J.K., Liu, X.Z., Liu, Z.Y., Luangsa-ard, J.J., Lücking, R., Lumbsch, H.T., Lumyong, S., Leanño, E.M., Marano, A.V., Matsumura, M., McKenzie, E.H.C., Mongkolsamrit, S., Mortimer, P.E., Nguyen, T.T.T., Niskanen, T., Norphanphoun, C., O’Malley, M.A., Parnmen, S., Pawłowska, J., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Pires-Zottarelli, C.L.A., Raspé, O., Reck, M.A., Rocha, S.C.O., de Santiago, A.L.C.M.A., Senanayake, I.C., Setti, L., Shang, Q.J., Singh, S.K., Sir, E.B., Solomon, K.V., Song, J., Srikitikulchai, P., Stadler, M., Suetrong, S., Takahashi, H., Takahashi, T., Tanaka, K., Tang, L.P., Thambugala, K.M., Thanakitpipattana, D., Theodorou, M.K., Thongbai, B., Thummarukcharoen, T., Tian, Q., Tibpromma, S., Verbeken, A., Vizzini, A., Vlasák, J., Voigt, K., Wanasinghe, D.N., Wang, Y., Weerakoon, G., Wen, H.A., Wen, T.C., Wijayawardene, N.N., Wongkanoun, S., Wrzosek, M., Xiao, Y.P., Xu, J.C., Yan, J.Y., Yang, J., Yang, S.D., Hu, Y., Zhang, J.F., Zhao, J., Zhou, L.W., Peršoh, D., Phillips, A.J.L. &amp; Maharachchikumbura, S.S.N. (2016) Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 78: 1–237. https://doi.org/10.1007/s13225-016-0366-9</p>
<p>Miller, M.A., Pfeiffer, W. &amp; Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. <em>In:</em> <em>Gateway Computing Environments Workshop (GCE)</em>. New Orleans, LA, pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129</p>
<p>Nylander, J.A.A. (2004) <em>MrModeltest v2</em>. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.</p>
<p>Pegler, D.N. (1986) <em>Agaric flora of Sri Lanka</em>. Kew Bulletin Additional Series XII, 519 pp.</p>
<p>Persoon, C.H. (1797) <em>Tentamen dispositionis methodicae fungorum in classes, ordines, genera et familias cum supplemento adjecto</em>. Petrum Philippum Wolf, Germany, 76 pp.&nbsp; https://doi.org/10.5962/bhl.title.42674</p>
<p>Phookamsak, R., Hyde, K.D., Jeewon, R., Bhat, D.J., Jones, E.B.G., Maharachchikumbura, S.S.N., Raspe, O., Karunarathna, S.C., Wanasinghe, D.N., Hongsanan, S., Doilom, M., Tennakoon, D.S., Machado, A.R., Firmino, A.L., Ghosh, A., Karunarathna, A., Mešić, A., Dutta, A.K., Thongbai, B., Devadatha, B., Norphanphoun, C., Senwanna, C., Wei, D.P., Pem, D., Ackah, F.K., Wang, G.N., Jiang, H.B., Madrid, H., Lee, h.b., Goonasekara, I.D., Manawasinghe, I.S., Kušan, I., Cano, J., Gene, j., Li, J.F., Das, K., Acharya, K., Raj, K.N.A., Latha, K.P.D., Chethana, K.W.T., He, M.Q., Dueñas, M., Jadan, M., Martín, M.P., Samarakoon, M.C., Dayarathne, M.C., Raza, M., Park, M.S., Telleria, M.T., Chaiwan, N., Matočec, N., De Silva, N.I., Pereira, O.L., Singh, P.N., Manimohan, P., Uniyal, P., Shang, Q.J., Bhatt, R.P., Perera, R.H., Alvarenga, R.L.M., Sandra, N.P., Singh, S.K., Vadthanarat, S., Oh, S.Y., Huang, S.K., Rana, S., Konta, S., Paloi, S., Jayasiri, S.C., Jeon, S.J., Mehmood, T., Gibertoni, T.B., Nguyen, T.T.T., Singh, U., Thiyagaraja, V., Sarma, V.V., Dong, W., Yu, X.D., Lu, Y.Z., Lim, Y.W., Chen, Y., Tkalčec, Z., Zhang, Z.F., Luo, Z.L., Daranagama, D.A., Thambugala, K.M., Tibpromma, S., Camporesi, E., Bulgakov, T.S., Dissanayake, A.J., Senanayake, I.C., Dai, D.Q., Tang, L.Z., Khan, S., Zhang, H., Promputtha, I., Cai, L., Chomnunti, P., Zhao, R.L., Lumyong, L., Boonmee, S., Wen, T.C., Mortimer, P.E. &amp; Xu, J.C. (2019) Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. <em>Fungal Diversity</em> 95: 1–273. https://doi.org/10.1007/s13225-019-00421-w</p>
<p>Pradeep, C.K. &amp; Vrinda, K.B. (2010) Ectomycorrhizal fungal diversity in three different forest types and their association with endemic, indigenous and exotic species in the Western Ghat forests of Thiruvananthapuram district, Kerala. <em>Journal of Mycopathological Research</em> 48 (2): 279–289.</p>
<p>Rambaut, A. (2012) <em>FigTree</em>. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 1 September 2017)</p>
<p>Rannala, B. &amp; Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. <em>Journal of Molecular Evolution</em> 43: 304–311. https://doi.org/10.1007/BF02338839</p>
<p>Rehner, S.A. &amp; Buckley, E. (2005) A Beauveria phylogeny inferred from nuclear ITS and <em>EF1-α</em> sequences: evidence for cryptic diversification and links to <em>Cordyceps</em> teleomorphs. <em>Mycologia</em> 97 (1): 84–98.&nbsp; https://doi.org/10.1080/15572536.2006.11832842</p>
<p>Ronquist, F. &amp; Huelsenbeck, J.P. (2003) <em>MrBayes3</em>: Bayesian phylogenetic inference under mixed models. <em>Bioinformatics</em> 19: 1572–1574. https://doi.org/10.1093/bioinformatics/btg180</p>
<p>Sanmee, R., Tulloss, R.E., Lumyong, P., Dell, B. &amp; Lumyong, S. (2008) Studies on <em>Amanita</em> (Basidiomycetes: Amanitaceae) in Northern Thailand. <em>Fungal Diversity</em> 3: 97–123.</p>
<p>Singer, R. (1951) The Agaricales (mushrooms) in modern taxonomy. <em>Lilloa</em> 22: 1–832.</p>
<p>Singer, R. (1954) Agaricales von Nahuel Huapi. <em>Sydowia</em> 8: 100–157.</p>
<p>Stamatakis, A. (2014) <em>RAxML Version 8: A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies</em>. Bioinformatics 10.1093/bioinformatics/btu033. Available from: http://bioinformatics.oxfordjournals.org/content/early/2014/01/21/bioinformatics.btu033.abstract (accessed 1 March 2021)</p>
<p>Thongbai, B., Hyde, K.D., Lumyong, S. &amp; Raspé, O. (2018) High undescribed diversity of <em>Amanita</em> section <em>Vaginatae</em> in northern Thailand. <em>Mycosphere</em> 9 (3): 462–494. https://doi.org/10.5943/mycosphere/9/3/3</p>
<p>Thongbai, B., Miller, S.L., Stadler, M., Stadler, M., Wittstein, K., Hyde, K.D., Lumyong, S. &amp; Raspé, O. (2017) Study of three interesting <em>Amanita</em> species from Thailand: Morphology, multiple-gene phylogeny and toxin analysis. <em>PLoS ONE</em> 12 (8): e0182131.&nbsp; https://doi.org/10.1371/journal.pone.0182131</p>
<p>Thongbai, B., Tulloss, R.E., Miller, S.L., Hyde, K.D., Chen, J., Zhao, R.L. &amp; Raspé, O. (2016) A new species and four new records of <em>Amanita</em> (Amanitaceae; Basidiomycota) from Northern Thailand. <em>Phytotaxa</em> 286 (4): 211–231. https://doi.org/10.11646/phytotaxa.286.4.1</p>
<p>Veselý, R. (1933) Revisio critica Amanitarum europaearum. <em>Annales Mycologici</em>&nbsp;31: 209–298.</p>
<p>Veselý, R. (1934) <em>Amanita. Atlas Champignon Europe, ser</em>. A&nbsp;1: 1–16.</p>
<p>Vilgalys, R. &amp; Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several <em>Cryptococcus</em> species. <em>Journal of Bacteriology</em> 172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990</p>
<p>White, T.J., Bruns, T., Lee, S. &amp; Taylor, J.W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. <em>In</em>: Innis, M.A., Gelfand, D.H, Sninsky, J.J. &amp; White, T.J. (Eds.) <em>PCR protocols: a guide to methods and applications</em>. Academic Press, San Diego, pp. 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1</p>
<p>Yang, Z.L. (1997) Die <em>Amanita</em>-Arten von Südwestchina. <em>Bibliotheca Mycologica</em> 170: 1–240.</p>
<p>Yang, Z.L. (2005) <em>Amanitaceae. Flora Fungorum Sinicorum 27</em>. Science Press, Beijing, China, 258 pp.</p>
<p>Yang, Z.L. (2015) <em>Atlas of the Chinese Species of Amanitaceae</em>. Science Press, Beijing, China, 213 pp.</p>
<p>Yang, Z.L. &amp; Doi, Y. (1999) A contribution to the knowledge of <em>Amanita</em> (Amanitaceae, Agaricales) in Japan. <em>Bulletin of the National Science Museum</em> <em>Tokyo</em>, Series B 25 (3):107–130.</p>
<p>Yang, Z.L., Weiß, M. &amp; Oberwinkler, F. (2004) New species of <em>Amanita</em> from the Eastern Himalaya and adjacent regions. <em>Mycologia</em> 96 (3): 636–646.&nbsp; https://doi.org/10.1080/15572536.2005.11832959</p>
<p>Zhang, L.F. &amp; Yang, Z.L. (2004) Recommendation of several methods for preserving the materials of macro fungi for molecular biological research. <em>Journal of Fungal Research</em> 2 (2): 60–61. &nbsp;https://doi.org/10.13341/j.jfr.2004.02.014</p>