Skip to main content Skip to main navigation menu Skip to site footer
Responsive image
Issue: Vol. 642 No. 1: 26 Mar. 2024
Type: Article
Published: 2024-03-26
DOI: 10.11646/phytotaxa.642.1.4
Page range: 50-60
Abstract views: 48
PDF downloaded: 1

Lyophyllum lixivium (Lyophyllaceae, Agaricales), a new species from Yunnan, China

School of Agriculture, Yunnan University, Kunming 650500, China, Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China
Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China, College of Agriculture and Biological Science, Dali University, Dali 671003, China
College of Biotechnology and Bioengineering, West Yunnan University, Lincang 677000, China
School of Agriculture, Yunnan University, Kunming 650500, China, Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China
School of Agriculture, Yunnan University, Kunming 650500, China, Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China
School of Agriculture, Yunnan University, Kunming 650500, China, Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China
Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China, College of Agriculture and Biological Science, Dali University, Dali 671003, China
Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205, China
Fungi Lyophyllaceae New species Phylogenetic analyses Taxonomy

Abstract

Lyophyllum lixivium sp. nov., collected from southwestern China, is described, illustrated, and discussed based on morphological characteristics and molecular data (ITS and nrLSU). Lyophyllum lixivium has umbonate to slightly depressed pileus, a cylindrical stipe that slightly enlarges towards the base, fuzz at the base, basidiospores mostly broadly ellipsoid, rarely fusiform lacrymoid or amygdaliform with an acute apex in side view, abundant clamp connections at the pileus surface and hymenophoral trama. Morphologically and phylogenetically similar species were compared with L. lixivium in this study.

References

  1. Blanco-Dios, J.B. (2012) Asterophora salvaterrensis (Basidiomycota, Agaricales), a new species from Galicia (Spain). Mycotaxon 118 (1): 83–88. https://doi.org/10.5248/118.83
  2. Caboň, M., Eberhardt, U., Looney, B., Hampe, F., Kolařík, M., Jančovičová, S., Verbeken, A. & Adamčík, S. (2017) New insights in Russula subsect. Rubrinae: phylogeny and the quest for synapomorphic characters. Mycological Progress 16 (9): 877–892. https://doi.org/10.1007/s11557–017–1322–0
  3. Capella-Gutiérrez, S., Silla-Martínez, J.M. & Gabaldón, T. (2009) TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25 (15): 1972–1973. https://doi.org/10.1093/bioinformatics/btp348
  4. Clémençon, H. & Smith, A. (1983) New species of Lyophyllum (Agaricales) from North America and a key to the known staining species. Mycotaxon 18: 379–437.
  5. Consiglio, G. & Contu, M. (2002) II genere Lyophyllum P. Karst. emend. Kühner, in Italia. River Micology 45 (2): 99–181.
  6. Cooper, J. (2014) New species and combinations of some New Zealand agarics belonging to Clitopilus, Lyophyllum, Gerhardtia, Clitocybe, Hydnangium, Mycena, Rhodocollydia and Gerronema. Mycosphere 5 (2): 263–288. https://doi.org/10.5943/mycosphere/5/2/2
  7. Dai, Y.C., Zhou, L.W., Yang, Z.L., Wen, H.A., Bau, T. & Li, T.H. (2010) A revised checklist of edible fungi in China. Mycosystema 29 (1): 1–21.
  8. Dähncke, R.M., Contu, M. & Vizzini, A. (2011) Two new species of Lyophyllum s.l. (Basidiomycota, Agaricomycetes) from La Palma (Canary Islands, Spain). Mycotaxon 111: 323–330. https://doi.org/10.5248/111.323
  9. Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9 (8): 772–772. https://doi.org/10.1038/nmeth.2109
  10. Gui, J., Wei, S. & Wang, S. (2011) A taxonomic study on genus Lyophyllum in Qilian mountain nature reserve. Acta Prataculturae Sinica 20 (5): 284–287.
  11. Hall, T.A. (1999) Bioedit: a user–friendly biological sequence alignment editor and analysis program for windows 95/98/ NT. Nucleic Acids Symposium Series 41: 95–98.
  12. Hall, T. (2007) BioEdit v7. [http://www.mbio.ncsu.edu/BioEdit/BioEdit.html]
  13. Hofstetter, V., Redhead, S.A., Kauff, F., Moncalvo, J.M., Matheny, P.B. & Vilgalys, R. (2014) Taxonomic revision and examination of ecological transitions of the Lyophyllaceae (Basidiomycota, Agaricales) based on a multigene phylogeny. Cryptogamie Mycologie 35: 399–425. https://doi.org/10.7872/crym.v35.iss4.2014.399
  14. Hu, Y., Karunarathna, S.C., Li, H., Galappaththi, M.C., Zhao, C.L., Kakumyan, P. & Mortimer, P.E. (2022) The Impact of Drying Temperature on Basidiospore Size. Diversity 14 (4): 239. https://doi.org/10.3390/d14040239
  15. Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772–780. https://doi.org/10.1093/molbev/mst010
  16. Li, X. & Li, Y. (2009) Present status and future prospects of Lyophyllum Karst. In China. Acta Edulis Fungi 16 (3): 75–79.
  17. Larsson, E. & Sundberg, H.(2011) Lyophyllum shimeji, a species associated with lichen pine forest in northern Fennoscandia. Mycoscience 52: 289–295. https://doi.org/10.1007/S10267–010–0104–1
  18. Matheny, P.B., Curtis, J.M., Hofstetter, V., Aime, M.C., Moncalvo, J.M. & Ge, Z.W. (2006) Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia 98 (6): 982–995. https://doi.org/10.1080/15572536.2006.11832627
  19. Ma, Y., Liu, P., Zhao, Z., Chen, W. & Zhao, Y. (2022) Lyophyllum pallidofumosum sp. nov. (Lyophyllaceae, Agaricales), from southwestern China. Phytotaxa 576 (2): 178–183. https://doi.org/10.11646/phytotaxa.576.2.3
  20. Ma, Y., Liu, P., Zhao, Z., Chen, W. & Zhao, Y. (2023) Lyophyllum deqinense (Lyophyllaceae, Agaricales), a new species from southwestern China. Phytotaxa 598 (3): 219–228. https://doi.org/10.11646/phytotaxa.598.3.3
  21. Miller, S.L. & Buyck, B. (2002) Molecular phylogeny of the genus Russula in Europe with a comparison of modern infrageneric classifications. Mycological Research 106 (3): 259–276. https://doi.org/10.1017/S0953756202005610
  22. Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In 2010 gateway computing environments workshop (GCE). Ieee, pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129
  23. Nilsson, R.H., Ryberg, M., Kristiansson, E., Abarenkov, K., Larsson, K.H. & Kõljalg, U. (2006) Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective. PloS One 1 (1): e59. https://doi.org/10.1371/journal.pone.0000059
  24. Singer, R. (1986) The Agaricales in Modern Taxonomy. Koeltz Scientific Books, Königstein, 1069 pp.
  25. Sandra, B., Visnovaky, N.C., Alexis, G.L., Yun W., Akiyoshi Y., Hisayasu K., Masataka K. & Andrew, R.P. (2014) Detection of the edible ectomycorrhizal fungus Lyophyllum shimeji cloning seedlings of cultivated conifer species in New Zealand. Mycorrhiza 24 (6): 453–463. https://doi.org/10.1007/s00572–013–0552–5
  26. Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post–analysis of large phylogenies. Bioinformatics 30 (9): 1312–1313. https://doi.org/10.1093/bioinformatics/btu033
  27. Tang, S.M., He, M.Q., Raspe, O., Luo, X., Zhang, X.L., Li Y.J., Su, K.M., Li, S.H., Thongklang, N. & Hyde, K.D. (2020) Two new species of Termitomyces (Agaricales, Lyophyllaceae) from China and Thailand. Phytotaxa 439 (3): 231–242. https://doi.org/10.11646/phytotaxa.439.3.5
  28. Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
  29. Varga, T., Krizsán, K., Földi, C., Dima, B., Sánchez-García, M., Sánchez-Ramírez, S., Szöllősi, G.J., Szarkándi, J.G., Papp, V., Albert, L., Andreopoulos, W., Angelini, C., Antonín, V., Barry, K.W., Bougher, N.L., Buchanan, P., Buyck, B., Bense, V., Catcheside, P., Chovatia, M., Cooper, J., Dämon, W., Desjardin, D., Finy, P., Geml, J., Haridas, S., Hughes, K., Justo, A., Karasiński, D., Kautmanova, I., Kiss, B., Kocsubé, S., Kotiranta, H., LaButti, K.M., Lechner, B.E., Liimatainen, K., Lipzen, A., Lukács, Z., Mihaltcheva, S., Morgado, L.N., Niskanen, T., Noordeloos, M.E., Ohm, R.A., Ortiz-Santana, B., Ovrebo, C., Rácz, N., Riley, R., Savchenko, A., Shiryaev, A., Soop, K., Spirin, V., Szebenyi, C., Tomšovský, M., Tulloss, R.E., Uehling, J., Grigoriev, I.V., Vágvölgyi, C., Papp, T., Martin, F.M., Miettinen, O., Hibbett, D.S. & Nagy, L.G. (2019) Megaphylogeny resolves global patterns of mushroom evolution. Nature Ecology & Evolution 3: 668–678. https://doi.org/10.1038/s41559-019-0834-1
  30. White, T.J., Bruns, T., Lee, S.J.W.T. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 18 (1): 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  31. Wang, X.Q., Zhou, D.Q., Zhao, Y.C., Zhang, X.L., Li, L. & Li, S.H. (2013) Lyophyllum rhombisporum sp. nov. from China. Mycotaxon 123: 473–477. https://doi.org/10.5248/123.473
  32. Wei, S.W., Lu, B.Y., Wang, Y., Dou, W.J., Wang, Q. & Li, Y. (2023) Morphology and phylogeny of Lyophylloid mushroom in China with description of four new species. Journal of Fungi 9 (1): 77. https://doi.org/10.3390/jof9010077
  33. Yuuichi, U., Yukio, F., Yasushi, K., Takafumi, N. & Makoto H. (2002) Effect of hatakeshimeji (Lyophyllum decastes Sing.) mushroom on serum lipid levels in rats. Journal of Nutritional Science and Vitaminology 48: 73–76. https://doi.org/10.3177/jnsv.48.73