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Type: Article
Published: 2023-12-20
Page range: 211-228
Abstract views: 82
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Revealing new records of hypocrealean fungicolous fungi from northern Thailand

Center of Excellence in Fungal Research; Mae Fah Luang University; Chiang Rai 57100; Thailand. School of Science; Mae Fah Luang University; Chiang Rai 57100; Thailand
Center of Excellence in Fungal Research; Mae Fah Luang University; Chiang Rai 57100; Thailand. School of Science; Mae Fah Luang University; Chiang Rai 57100; Thailand. Kyung Hee University; 26 Kyungheedae-ro; Dongdaemun-gu; Seoul 02447; South Korea
Center of Excellence in Fungal Research; Mae Fah Luang University; Chiang Rai 57100; Thailand
Fungi Geographical records Host record Hypomyces Mariannaea Phylogeny Taxonomy

Abstract

Hypocreales comprise a diverse group of fungi that exhibit a wide range of lifestyles in both aquatic and terrestrial environments. A significant number of the identified fungicolous taxa belong to Hypocreales. Samples were collected from Chiang Rai and Chiang Mai Provinces during an investigation on fungicolous fungi in northern Thailand. Based on morphological characteristics and multi-gene phylogenetic analyses of ITS-LSU-tef1α-rpb2 and ITS-LSU-tub2-tef1α, two isolates were identified as Hypomyces sichuanensis (Hypocreaceae) and Mariannaea humicola (Nectriaceae) respectively. This study marks the first documentation of Hypomyces sichuanensis and Mariannaea humicola as fungicolous species from Thailand. Additionally, the study reveals a novel host record for M. humicola on Marasmius sp.

 

References

  1. Arnaud, G. (1952) Mycologie concrète: Genera. Bulletin trimestriel de la Société mycologique de France 68: 181–223.
  2. Bao, D.F., Hyde, K.D., Maharachchikumbura, S.S., Perera, R.H., Thiyagaraja, V., Hongsanan, S., Wanasinghe, D.N., Shen, H.W., Tian, X.G., Yang, L.Q. & Nalumpang, S. (2023) Taxonomy, phylogeny and evolution of freshwater Hypocreomycetidae (Sordariomycetes). Fungal Diversity 121: 1–94. https://doi.org/10.1007/s13225-023-00521-8
  3. Boonmee, S., Wanasinghe, D.N., Calabon, M.S., Huanraluek, N., Chandrasiri, S.K.U., Jones, G.E.B., Rossi, W., Leonardi, M., Singh., S.K., Rana, S., Singh, P.S., Maurya, D.K., Lagashetti, A.C., Choudhary, D., Dai, Y., Zhao, C.,Mu, Y., Yuan, H., He, S., Phookamsak, R., Jiang, H., Martín, M.P., Dueñas, M., Telleria, M.T., Kałucka, I.L., Jagodziński, A.M., Liimatainen, K., Pereira, D.S., Phillips, A.J., Suwannarach, N.,Kumla, J., Khuna, S., Lumyong, S., Potter, T.B., Shivas, R.G., Sparks, A.H., Vaghef, N., Abdel‑Wahab, M.A., ·Abdel‑Aziz, F.A., Li, G., Lin, W., Singh, U., Bhatt, R.P., Lee, H.B, Nguyen, T.T.T., Kirk, P.M., Dutta, A.K., Sarma, K.A.V.V., Niranjan, M., Rajeshkumar, K.C., Ashtekar, N., Lad, S., Wijayawardene, N.N., Bhat, D.J., Xu, R., Wijesinghe, S.N.,Shen, H., Luo, Z., Zhang, J., Sysouphanthong, P., Thongklang, N., Bao, D., Aluthmuhandiram, J.V.S., Abdollahzadeh, J., Javadi, A., Dovana, F., Usman, F.,Khalid, A.N., Dissanayake, A.J., Telagathoti, A., Probst, M., Peintner, U., Garrido‑Benavent, I., Bóna, L., Merényi, Z., Boros, L., Zoltán, B.,·Stielow, J.B., Jiang, N., Tian, C., Shams, E., Dehghanizadeh, F., Porde, A., Javan‑Nikkhah, M., Denchev, T.T., Denchev, C.M., Kemler, M., Begerow, D.,Deng, C., Harrower, E., Bozorov, T., Kholmuradova, T., Gaforov, Y.,·Abdurazakov, A., Xu, J., Mortimer, P.E., Ren, G., Jeewon, R., Maharachchikumbura, S.S.N., Phukhamsakda, C., Mapook, A. & Hyde, K.D. (2021) Fungal diversity notes 1387–1511: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity 111: 1–335. https://doi.org/10.1007/s13225-021-00489-3
  4. Botta, L., Saladino, R., Barghini, P., Fenice, M. & Pasqualetti, M. (2020) Production and identification of two antifungal terpenoids from the Posidonia oceanica epiphytic Ascomycota Mariannaea humicola IG100. Microbial cell factories 19: 1–10. https://doi.org/10.1186/s12934-020-01445-7
  5. Bhunjun, C.S., Niskanen, T., Suwannarach, N., Wannathes, N., Chen, Y.J., McKenzie, E.H., Maharachchikumbura, S.S., Buyck, B., Zhao, C.L., Fan, Y.G., Zhang, J.Y., Dissanayake, A.J., Marasinghe, D.S., Jayawardena, R.S., Kumla, J., Padamsee, M., Chen, Y., Liimatainen, K., Ammirati, J.F., Phukhamsakda, C., Liu, J., Phonrob, W., Randrianjohany, E., Hongsanan, S., Cheewangkoon, R., Bundhun, D., Khuna, S., Yu, W., Deng, L., Lu, Y., Hyde, K.D. & Lumyong, S. (2022) The numbers of fungi: are the most speciose genera truly diverse?. Fungal Diversity 114 (1): 387–462.
  6. Cai, L., Kurniawati, E. & Hyde KD. (2010) Morphological and molecular characterization of Mariannaea aquaticola sp. nov. collected from freshwater habitats. Mycological Progress 9: 337–343. https://doi.org/10.1007/s11557-009-0641-1
  7. Capella-Gutiérrez, S., Silla-Martínez, J.M. & Gabaldón, T. (2009) TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25 (15): 1972–1973. [https://academic.oup.com/bioinformatics/article/25/15/1972/213148]
  8. Chernomor, O., von Haeseler, A. & Minh, B.Q. (2016) Terrace aware data structure for phylogenomic inference from super matrices. Systematic Biology 65 (6): 997–1008. [https://academic.oup.com/sysbio/article/65/6/997/2281634]
  9. Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9 (8): 772–772. [https://www.nature.com/articles/nmeth.2109]
  10. Farr, D.F., Rossman, A.Y. & Castlebury, L.A. (2021) United States National Fungus Collections Fungus-Host Dataset. Ag Data Commons. Avilable from: https://doi.org/10.15482/USDA.ADC/1524414 (accessed: 15 July 2023).
  11. Fries, E. (1825) Systema orbis vegetabilis: Primas lineas novae constructionis periclitatur Elias Fries. e Typographia Academica.
  12. Gams, W., Diederich, P. & Põldmaa, K. (2004) Fungicolous fungi. In: Biodiversity of fungi: Inventory and Monitoring Methods. pp. 343–392.
  13. Gu, X., Fu, R., Wang, R. & Sun, J. (2021) Two new Hypomyces associated with boletoid fungi in China. Phytotaxa 516 (1): 28–42. https://doi.org/10.11646/phytotaxa.516.1.2
  14. Hall, T.A. (1999) BioEdit: a user-friendly biological sequence align-ment editor and analysis program for Windows 95/ 98/NT. Nucleic Acid Symposium Series 41: 95–98.
  15. Hao, Y., Gen-Nuo, W. & Huang, Z. (2021) Mariannaea submersa sp. nov., with a new habitat and geographic record of Mariannaea catenulata. Mycosystema 40 (6): 1286–1298. https://doi.org/10.13346/j.mycosystema.200186
  16. Hu, D.M., Wang, M. & Cai, L. (2017) Phylogenetic assessment and taxonomic revision of Mariannaea. Mycological Progress 16: 271–283. [https://link.springer.com/article/10.1007/s11557-016-1252-2]
  17. Huelsenbeck, J.P. & Ronquist, F. (2001) MrBayes: bayesian inference of phylogenetic trees. Bioinformatics 17 (8): 754–755. https://doi.org/10.1093/bioinformatics/17.8.754
  18. Hyde, K.D., Jeewon, R., Chen, Y.J., Bhunjun, C.S., Calabon, M.S., Jiang, H.B., Lin, C.G., Norphanphoun, C., Sysouphanthong, P., Pem, D., Tibpromma, S., Zhang, Q., Doilom, M., Jayawardena, R.S., Liu, J.K., Maharachchikumbura, S.S.N., Phukhamsakda, C., Phookamsak, R., Al-Sadi, A.M., Naritsada, T., Wang, Y., Gafforov, Y., Jones, E.B.G. & Lumyong, S. (2020) The numbers of fungi: is the descriptive curve flattening? Fungal Diversity 103: 219–271. https://doi.org/10.1007/s13225-020-00458-2
  19. Index Fungorum. (2023) Available from: http://www.indexfungorum.org/Names/Names.asp (accessed: 15 July 2023).
  20. Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., Dai, Y.C., Abd-Elsalam, K.A., Ertz, D., Hidayat, I., Jeewon,R., Jones, E.B.G., Bahkali, A.H., Karunarathna, S.C., Liu, J.K., Luangsa-ard, J.J., Lumbsch, H.T., Maharachchikumbura, S.S.N.,McKenzie, E.H.C., Moncalvo Jean-Marc, Ghobad-Nejhad, M., Nilsson, H., Pang, Ka-Lai., Pereira, O.L., Phillips, A.J.L., Raspé,O., Rollins, A.W., Romero, A.I., Etayo, J., Selçuk, F., Stephenson, S.L., Suetrong, S., Taylor, J.E., Tsui, C.K.M., Vizzini, A., Abdel-Wahab, M.A., Wen, Ting-Chi, Boonmee, S., Dai, Dong-Qin., Daranagama, D.A., Dissanayake, A.J., Ekanayaka, A.H., Fryar, S.C.,Hongsanan, S., Jayawardena, R.S., Li, Wen-Jing., Perera, R.H., Phookamsak, R., Silva, N.I.de., Thambugala, K.M., Tian, Q.,Wijayawardene, N.N., Zhao, Rui-Lin., Zhao, Q., Kang Ji-Chuan. & Promputtha, I. (2015) The Faces of Fungi database: fungal nameslinked with morphology, phylogeny and human impacts. Fungal Diversity 74: 3–18. https://doi.org/10.1007/s13225-015-0351-8
  21. Karimi, O., Rathnayaka, A.R., Gajanayake, A.J., Farias, A.R.G. Mamarabadi, M. & Chethana, K.W.T. (2022) Taxonomy and phylogenetic appraisal of Hypomyces iranica sp. nov. (Hypocreaceae, Hypocreales). Asian Journal of Mycology 5 (2): 187–201. [https://asianjournalofmycology.org/pdf/AJOM_5_2_8-1.pdf]
  22. Katoh, K., Rozewicki, J. & Yamada., K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20 (4): 1160–1166. https://doi.org/10.1093/bib/bbx108
  23. Le, P.N.M. (2019) Mycorrhizae on Roots of Quercus havardii Growing in Habitat and Non-habitat Soils. Thesis. Texas State University, United States.
  24. Lechat, C., Gardiennet, A. & Fournier, J. (2017) First report of a lichenicolous species of Hypomyces (Hypocreaceae), H. peltigericola sp. nov. Ascomycete Org. 9 (2): 23–26. https://doi.org/10.25664/art-0197
  25. Lombard, L., Van der Merwe, N.A., Groenewald, J.Z. & Crous, P.W. (2015) Generic concepts in Nectriaceae. Studies in Mycology 80 (1): 189–245. https://doi.org/10.1016/j.simyco.2014.12.002
  26. Maurice, S., Arnault, G., Nordén, J., Botnen, S.S., Miettinen, O. & Kauserud, H. (2021) Fungal sporocarps house diverse and host-specific communities of fungicolous fungi. The ISME Journal 15 (5): 1445–1457. [https://www.nature.com/articles/s41396-020-00862-1]
  27. Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: 2010 Gateway Computing Environments Workshop (GCE). IEEE, pp. 1–8.
  28. Nguyen, L., Schmidt, H., von Haeseler, A. & Minh, B.Q. (2014) IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution 32 (1): 268–274. https://doi.org/10.1093/molbev/msu300
  29. Pasqualetti, M., Giovannini, V., Barghini, P., Gorrasi, S. & Fenice, M. (2020) Diversity and ecology of culturable marine fungi associated with Posidonia oceanica leaves and their epiphytic algae Dictyota dichotoma and Sphaerococcus coronopifolius. Fungal Ecology 44: 100906. https://doi.org/10.1016/j.funeco.2019.100906
  30. Perera, R.H., Hyde, K.D., Jones, E.B.G., Maharachchikumbura, S.S.N., Bundhun, D., Camporesi, E., Akulov, A., Liu, J.k. & Liu, Z.Y. (2023) Profile of Bionectriaceae, Calcarisporiaceae, Hypocreaceae, Nectriaceae, Tilachlidiaceae, Ijuhyaceae fam. nov., Stromatonectriaceae fam. nov. and Xanthonectriaceae fam. nov. Fungal Diversity 118 (1): 95–271. [https://link.springer.com/article/10.1007/s13225-022-00512-1#Abs1]
  31. Põldmaa, K. (1996) A new species of Hypomyces and three of Cladobotryum from Estonia. Mycotaxon 59: 389–405.
  32. Põldmaa, K. (2003) Three species of Hypomyces growing on basidiomata of Stereaceae. Mycologia 95: 921–933. https://doi.org/10.1080/15572536.2004.11833051
  33. Põldmaa, K., Larsson, E. & Kõljalg, U. (2000) Phylogenetic relationships in Hypomyces and allied genera, with emphasis on species growing on wood-decaying homobasidiomycetes. Canadian Journal of Botany 77 (12): 1756–1768. https://doi.org/10.1139/b99-148
  34. Põldmaa, K. (2000) Generic delimitation of the fungicolous Hypocreaceae. Studies in Mycology 45: 83–94. [http://www.studiesinmycology.org/sim/Sim45/content/pdf/083-094.pdf]
  35. Põldmaa, K. (2011) Tropical species of Cladobotryum and Hypomyces producing red pigments. Studies in Mycology 68: 1–34. https://doi.org/10.3114/sim.2011.68.01
  36. Rambaut, A. (2011) FigTree. Tree figure drawing tool version 1.3.1, Institute of Evolutionary Biology, University of Edinburgh. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed: 25 July 2023).
  37. Rogerson, C.T. & Samuels, G.J. (1989) Boleticolous species of Hypomyces. Mycologia 81: 413–432. https://doi.org/10.1080/00275514.1989.12025764
  38. Rogerson, C.T. & Samuels, G.J. (1993) Polyporicolous species of Hypomyces. Mycologia 85: 231–272. https://doi.org/10.1080/00275514.1992.12026272
  39. Rogerson, C.T. & Samuels, G.J. (1994) Agaricolous species of Hypomyces. Mycologia 86: 839–866. https://doi.org/10.1080/00275514.1994.12026489
  40. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542. https://doi.org/10.1093/sysbio/sys029
  41. Rossman, A.Y., Samuels, G.J., Rogerson, C.T. & Lowen, R. (1999) Genera of bionectriaceae, hypocreaceae and nectriaceae (Hypocreales, Ascomycetes). Studies in Mycology 42: 1–248.
  42. Samson, R.A. (1974) Paecilomyces and some allied hyphomycetes. Studies in Mycology 6: 1–117.
  43. Senanayake, I.C., Rathnayaka, A.R., Marasinghe, D.S., Calabon, M.S., Gentekaki, E., Lee, H.B., Hurdeal, V.G., Pem, D., Dissanayake, L.S., Wijesinghe, S.N., Bundhun, D., Nguyen, T.T., Goonasekara, I.D., Abeywickrama, P.D., Bhunjun, C.S., Jayawardena, R.S., Wanasinghe, D.N., Jeewon, R., Bhat, D.J. & Xiang, M.M. (2020) Morphological approaches in studying fungi: Collection, examination, isolation, sporulation and preservation. Mycosphere 11 (1): 2678–2754. https://doi.org/10. 5943/mycosphere/11/1/20.
  44. Species Fungorum. (2023) Available from: https://www.speciesfungorum.org/Names/Names.asp. (accessed: 15 July 2023).
  45. Sun, J.Z., Liu, X.Z., McKenzie, E.H., Jeewon, R., Liu, J.K., Zhang, X.L., Zhao, Q. & Hyde, K.D. (2019) Fungicolous fungi: terminology, diversity, distribution, evolution, and species checklist. Fungal Diversity 95: 337–430. https://doi.org/10.1007/s13225-019-00422-9
  46. Tamm, H. & Põldmaa, K. (2013) Diversity, host associations, and phylogeography of temperate aurofusarin-producing Hypomyces/ Cladobotryum including causal agents of cobweb disease of cultivated mushrooms. Fungal Biology 117: 348–367. https://doi.org/10.1016/j.funbio.2013.03.005
  47. Tulasne, L.R. & Tulasne, C. (1860) De quelques Spheries fongicoles, a propos d’un memoire de M. Antoine de Bary sur les Nyctalis. Annales des Sciences Naturelles; Botanique 13: 5–19.
  48. Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172 (8): 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
  49. Watanabe, K. & Dai, H. (2021) A novel Mariannaea species isolated from decayed pine needles in Japan. Phytotaxa 522 (3): 211–220.
  50. White, T.J., Bruns, T.D., Lee, S.B. & Taylor, J.W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Michael, A.I., David, H.G., John, J.S. & Thomas, J.W. (eds.) PCR protocols, A guide to methods and applications. New York (United States): Academic Press, Inc. pp. 315–322.
  51. Wijayawardene, N.N., Hyde, K.D., Dai, D.Q., Sánchez-García, M., Goto, B.T., Saxena, R.K., Erdoğdu, M., Selçuk, F., Rajeshkumar, K.C., Aptroot, A., Błaszkowski, J., Boonyuen, N., da Silva, G.A., de Souza, F.A., Dong, W., Ertz, D., Haelewaters, D., Jones, E.B.G., Karunarathna, S.C., Kirk, P.M., Kukwa, M., Kumla, J., Leontyev, D.V., Lumbsch, H.T., Maharachchikumbura, S.S.N., Marguno, F., Martínez-Rodrígue, P., Mešić, A., Monteiro, J.S., Oehl, F., Pawłowska, J., Pem, D., Pfliegler, W.P., Phillips, A.J.L., Pošta, A., He, M.Q., Li, J.X., Raza, M., Sruthi, O.P., Suetrong, S., Suwannarach, N., Tedersoo, L., Thiyagaraja, V., Tibpromma, S., Tkalčec, Z., Tokarev, Y.S., Wanasinghe, D.N., Wijesundara, D.S.A., Wimalaseana, S.D.M.K., Madrid, H., Zhang, G.Q., Gao, Y., Sánchez-Castro, I., Tang, L.Z., Stadler, M., Yurkov, A. & Thines, M. (2022a) Outline of Fungi and fungus-like taxa–2021. Mycosphere 13 (1): 53–453.
  52. Wijayawardene, N.N., Phillips, A.J., Pereira, D.S., Dai, D.Q., Aptroot, A., Monteiro, J.S., Irina, S.D., Feng, C., Xinlei, F., Selbmann, L., ·Coleine, C., Castañeda‑Ruiz, R.F., Kukwa, M., Flakus, A., Fiuza, P.O., Kirk, P.M., Rajesh Kumar, K.C., leperuma Arachchi, I.S., Suwannarach, N., ·Tang, L., Boekhout1, T., Tan, C.S., Jayasinghe, R.P.B.K. & Thines, M. (2022b) Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota). Fungal Diversity 114 (1): 463–490. https://doi.org/10.1007/s13225-022-00500-5
  53. Yu, F.M., Jayawardena, R.S., Liu, J., Hyde, K.D. & Zhao, Q. (2020) Hypomyces pseudolactifluorum sp. nov. (Hypocreales: Hypocreaceae) on Russula sp. from Yunnan, PR China. Biodiversity Data Journal 8: e53490. https://doi.org/10.3897/BDJ.8.e53490