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Type: Article
Published: 2023-06-21
Page range: 73-83
Abstract views: 267
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A new species of Calocybe (Agaricales, Basidiomycota) from China

Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China
Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China
Lyophyllaceae new species phylogeny taxonomy Fungi

Abstract

Morphological and molecular phylogenetic data were used to describe a new Calocybe species (C. violacea) collected from Yunnan Province, China. Calocybe violacea is characterized by its convex to applanate, purple to bluish-purple pileus; purple-black, bluish-purple to white stipe; and relatively larger basidiospores. Phylogenetic analyses of the combined ITS and nrLSU loci supported the distinct position of this proposed new species, showing that C. violacea clustered in a single sister clade with C. vinacea.

References

  1. Akata, İ., Buyuk, İ., Altuntas, D. & Sesli, E. (2019) Calocybe persicolor, A New Record for the Turkish Mycota. Gazi University Journal of Science 32 (4): 1097–1103. https://doi.org/10.35378/gujs.523498
    Baroni, T.J., Legon, N.W., Vilgalys, R. & Lodge, D.J. (1999) Calocybe cyanea: a rare and beautiful agaric is discovered in Puerto Rico. Mycologist 13 (1): 7–10. https://doi.org/10.1016/S0269-915X(99)80065-2
    Bellanger, J.M., Moreau, P.A., Corriol, G., Bidaud, A., Chalange, R., Dudova, Z. & Richard, F. (2015) Plunging hands into the mushroom jar: a phylogenetic framework for Lyophyllaceae (Agaricales, Basidiomycota). Genetica 143 (2): 169–194. https://doi.org/10.1007/s10709-015-9823-8
    Dai, Y.C., Zhou, L.W., Yang, Z.L., Wen, H.A., Bau, T. & Li, T.H. (2010) A revised checklist of edible fungi in China. Mycosystem 29 (1): 1–21.
    Edler, D., Klein, J., Antonelli, A. & Silvestro, D. (2021) raxmlGUI 2.0: A graphical interface and toolkit for phylogenetic analyses using RA×ML. Methods in Ecology and Evolution 12 (2): 373–377. https://doi.org/10.1111/2041-210X.13512.
    Hofstetter, V., Clémençon, H., Vilgalys, R. & Moncalvo, J.M. (2002) Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences. Mycological Research 106 (9): 1043–1059. https://doi.org/10.1017/S095375620200641X
    Hofstetter, V., Redhead, S.A., Kauff, F., Moncalvo, J.M., Matheny, P.B. & Vilgalys, R. (2014) Taxonomic revision and examination of ecological transitions of the Lyophyllaceae (Basidiomycota, Agaricales) based on a multigene phylogeny. Cryptogamie mycologie 35 (4): 399–425. https://doi.org/10.7872/crym.v35.iss4.2014.399
    Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in bioinformatics 20 (4): 1160–1166. https://doi.org/10.1093/bib/bbx108.
    Kornerup, A., Wanscher, J.H. (1978) Methuen Handbook of Colour. Eyre Methuen, London, UK, 252 pp.
    Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular biology and evolution 33 (7): 1870–1874. https://doi.org/10.1093/molbev/msw054
    Kühner, R. (1938) Utilisation du carmin acétique dans la classification des agarics leucosporés. Publications de la Société Linnéenne de Lyon 7 (7): 204–211.  https://doi.org/10.3406/linly.1938.9364
    Li, J.J., Wu, S.Y., Yu, X.D., Zhang, S.B. & Cao, D.X. (2017) Three new species of Calocybe (Agaricales, Basidiomycota) from northeastern China are supported by morphological and molecular data. Mycologia 109 (1): 55–63. https://doi.org/10.1080/00275514.2017.1286570
    Moncalvo, J.M., Lutzoni, F.M., Rehner, S.A., Johnson, J. & Vilgalys, R. (2000) Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Systematic biology 49 (2): 278–305. https://doi.org/10.1093/sysbio/49.2.278
    Moncalvo, Jean-Marc, Vilgalys, Rytas, Redhead, S.A., Johnson, J.E., James, T.Y., Catherine Aime, M., Hofstetter, V., Verduin, S.J.W., Larsson, E., Baroni, T.J., Greg Thorn, R., Jacobsson, S., Clémençon, H. & Miller Jr., O.K. (2002) One hundred and seventeen clades of euagarics. Molecular phylogenetics and evolution 23 (3): 357–400. https://doi.org/10.1016/S1055-7903(02)00027-1
    Qi, Y., Xu, A., Zhou, Y., Bi, K., Qin, W., Guo, H. & Yu, X. (2022) Morphological and phylogenetic studies of three new species of Calocybe (Agaricales, Basidiomycota) from China. Diversity 14 (8): 643. https://doi.org/10.3390/d14080643
    Rambaut, A. (2016) FigTree v1.4.3 2006–2016. Tree Figure Drawing Tool. Online publication. Institute of Evolutionary Biology University of Edinburgh. [https://vcru.wisc.edu/simonlab/bioinformatics/programs/figtree/README.txt]
    Ronquist, F., Teslenko, M., Van Der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic biology 61 (3): 539–542. https://doi.org/10.1093/sysbio/sys029
    Singer, R. (1986) The Agaricales in modern taxonomy. 4th edn Koeltz Scientific Books. Koenigstein, Germany, 981 pp.
    White, T.J., Bruns, T., Lee, S.J.W.T. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 18 (1): 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
    Wu, F., Zhou, L.W., Yang, Z.L., Bau, T., Li, T.H. & Dai, Y.C. (2019) Resource diversity of Chinese macrofungi: edible, medicinal and poisonous species. Fungal Diversity 98 (1): 1–76. https://doi.org/10.1007/s13225-019-00432-7
    Xu, J.Z., Yu, X., Zhang, C. & Li, Y. (2019) Two new species of Calocybe (Lyophyllaceae) from northeast China. Phytotaxa 425 (4): 219–232. https://doi.org/10.11646/phytotaxa.425.4.3
    Xu, J.Z., Yu, X., Suwannarach, N., Jiang, Y., Zhao, W. & Li, Y. (2021a) Additions to Lyophyllaceae s.l. from China. Journal of Fungi 7 (12): 1101. https://doi.org/10.3390/jof7121101
    Xu, J.Z., Yu, X., Zhang, C. & Li, Y. (2021b) Morphological characteristics and phylogenetic analyses revealed a new Calocybe (Lyophyllaceae, Basidiomycota) species from northeast China. Phytotaxa 490 (2): 203–210. https://doi.org/10.11646/phytotaxa.490.2.7