Abstract
An interesting endophytic fungus was isolated from the stem of Ephedra gerardiana growing in Ladakh, a cold arid desert and a part of trans-Himalayan region in Northwest India. Based on comprehensive cultural, micro-morphological, and phylogenetic analyses, the isolate was identified as a new species of the genus Comoclathris, proposed herein as C. acuminata. The novelty of the taxon was strongly supported by the concatenated dataset based on nuclear ribosomal internal transcribed spacer (nrITS) and large subunit (nrLSU) regions of DNA. It is characterized by predominantly superficial, dark-brown to black, ostiolate ascomata, cylindro-clavate asci, and muriform ascospores. Comoclathris acuminata differs from other known species of Comoclathris in bearing ascospores with a prominent beak-like or pointed apex. A detailed description, illustrations and phylogenetic results of the new species are provided along with its comparison with the allied species.
References
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Ariyawansa, H.A., Hyde, K.D., Jayasiri, S.C., Buyck, B., Chenthana, K.W.T., Dai, D.Q., Dai, Y.C, Daranagama, D.A., Jayawardena, R.S., Lücking, R., Ghobad-Nejhad, M., Niskanen, T., Thambugala, K.M., Voigt,K., Zhao, R.L., LiG, J., Doilom, M., Boonmee, S., Yang, Z.L., Cai, Q., Cui, Y.Y., Bahkali, A.H., Chen, J., Cui, B.K., Chen, J.J., Dayarathne, M.C., Dissanayake, A.J., Ekanayaka, A.H., Hashimoto, A., Hongsanan, S., Jones, E.B.G., Larsson, E., Li, W.J., Li, Q.R., Liu, J.K., Luo, Z.L., Maharachchikumbura, S.S.N., Mapook, A., McKenzie, E.H.C., Norphanphoun, C., Konta, S., Pang, K.L., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Pinruan, U., Randrianjohany, E., Singtripop, C., Tanaka, K., Tian, C.M., Tibpromma, T., Abdel-Wahab, M.A., Wanasinghe, D.N., Wijayawardene, N.N., Zhang, J.F., Zhang, H., Abdel-Aziz, F.A., Wedin, M., Westberg, M., Ammirati, J.F., Bulgakov, T.S., Lima, D.X., Callaghan, T.M., Callac, P., Chang, C.H., Coca, L.F., Dal-Forno, M., Dollhofer, V., Fliegerova, K., Greiner, K., Griffith, G.W., Ho, H.M., Hofstetter, V., Jeewon, R., Kang, J.C., Wen, T.C., Kirk, P.M., Kytövuori, I., Lawrey, J.D., Xing, J., Li, H., Liu, Z.Y., Liu, X.Z., Liimatainen, K., Lumbsch, T.H., Matsumura, M., Moncada, B., Nuankaew, S., Parnmen, S., Santiago, A.L.C.M.D.A., Sommai, S., Song, Y., deSouza, C.A.F., deSouza-Motta, C.M., Su, H.Y., Suetrong, S., Wang, Y., Wei, S.F., Yuan, H.S., Zhou, L.W., Réblová, M., Fournier, J., Camporesi, E., Luangsa-ard, J.J., Tasanathai, K., Khonsanit, A., Thanakitpipattana, D., Somrithipol, S., Diederich, P., Millanes, A.M., Common, R.S., Stadler, M., Yan, J.Y., Li, X.H., Lee, H.W., Nguyen, T.T.T., Lee, H.B., Battistin, E., Marsico, O., Vizzini, A., Vila, J., Ercole, E., Eberhardt, U., Simonini, G., Wen, H.A., Chen, X.H., Miettinen, O., Spirin, V. & Hernawati, H. (2015a) Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 75: 27–274. https://doi.org/10.1007/s13225-015-0346-5</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Barr, M.E. (1987a) <em>Prodromus to class loculoascomycetes</em>. Amherst. University of Massachusetts, Massachusetts.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Barr, M.E. (1987b) New taxa and combinations in the Loculoascomycetes. <em>Mycotaxon</em> 29: 501–505.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Berbee, M.L. (1996) Loculoascomycete origins and evolution of filamentous ascomycete morphology based on 18S rRNA gene sequence data. <em>Molecular Biology and Evolution</em> 13: 462–470. https://doi.org/10.1093/oxfordjournals.molbev.a025607</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Boonmee, S., Wanasinghe, D.N., Calabon, M.S., Huanraluek, N., Chandrasiri, S.K., Jones, G.E., Rossi, W., Leonardi, M., Singh, S.K., Rana, S. & Singh, P.N. (2021) Fungal diversity notes 1387–1511: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. <em>Fungal Diversity</em> 111: 1–335. https://doi.org/10.1007/s13225-021-00489-3 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Brahmanage, R.S., Dayarathne, M.C., Wanasinghe, D.N., Thambugala, K.M., Jeewon, R., Chethana, K.T., Samarakoon, M.C., Tennakoon, D.S., De Silva, N.I., Camporesi, E. and Raza, M. (2020) Taxonomic novelties of saprobic Pleosporales from selected dicotyledons and grasses. <em>Mycosphere</em> 11 (1): 2481–2541. https://doi.org/10.5943/mycosphere/11/1/15</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Clements, F.E. (1909) The genera of fungi. Vol. 37 (173). The HW Wilson Company, pp. 1–227. https://doi.org/10.5962/bhl.title.54501</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Crous, P.W., Wingfield, M.J., Schumacher, R.K., Summerell, B.A., Giraldo, A., Gené, J., Guarro, J., Wanasinghe, D.N., Hyde, K.D., Camporesi, E., Jones, G.E.B., Thambugala, K.M., Malysheva, E.F., Malysheva, V.F., Acharya, K., Álvarez, J., Alvarado, P., Assefa, A., Barnes, C.W., Bartlett, J.S., Blanchette, R.A., Burgess, T.I., Carlavilla, J.R., Coetzee, M.P., Damm, U., Decock, C.A., den Breeÿen, A., de Vries, B., Dutta, A.K., Holdom, D.G., Rooney-Latham, S., Manjón, J.L., Marincowitz, S., Mirabolfathy, M., Moreno, G., Nakashima, C., Papizadeh, M., Shahzadeh Fazeli, S.A., Amoozegar, M.A., Romberg, M.K., Shivas, R.G., Stalpers, J.A., Stielow, B., Stukely, M.J., Swart, W.J., Tan, Y.P., van der Bank, M., Wood, A.R., Zhang, Y. & Groenewald, J.Z. (2014a) Fungal Planet description sheets: 281–319. <em>Persoonia</em> 33: 212–289. https://doi.org/10.3767/003158514X685680</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Crous, P.W., Shivas, R.G., Quaedvlieg, W., Bank, M., Zhang, Y., Summerell, B.A., Guarro, J., Wingfield, N.J., Wood, A.R., Alfenas, A.C., Braun, U., Cano-Lira, J.F., Garcia, D., Marin-Felix, Y., Alvarado, P., Andrade, J.P., Armengol, J., Assefa, A., Breeyen, A., Camele, I., Cheewangkoon, R., Souza, J.T.D., Duong, T.A., Esteve-Raventos, F., Fournier, J., Frisullo, S., Garcia-Jimenez, J., Gardiennet, A., Gene, J., Hernandez-Restrepo, M., Hirooka, Y., Hospenthal, D.R., King, A., Lechat, C., Lombard, L., Mang, S.M., Marbach, P.A.S., Marincowitz, S., Marin-Felix, Y., Montano-Mang, N.J., Moreno, G., Perez, C.A., Sierra, A.M.P., Robertson, J.L., Roux, J., Rubio, E., Schumacher, R.K., Stchigel, A.M., Sutton, D.A., Tan, Y.P., Thompson, E.H., Linde, E., Walker, A.K., Walker, D.NM., Wickes, B.L., Wong, P.T.W. & Groeewald, J.Z. (2014b) Fungal Planet Description Sheets: 214–280. <em>Persoonia</em> 32: 184–306. https://doi.org/10.3767/003158514X682395</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Crous, P.W., Cowan, D.A., Maggs‐Kölling, G., Yilmaz, N., Thangavel, R., Wingfield, M.J., Noordeloos, M.E., Dima, B., Brandrud, T.E., Jansen, G.M., Morozova, O.V., Vila, J., Shivas, R.G., Tan, Y.P., Bishop‐Hurley, S., Lacey, E., Marney, T.S., Larsson, E., Le Floch, G., Lombard, L., Nodet, P., Hubka, V., Alvarado, P., Berraf‐Tebbal, A., Reyes, J.D., Delgado, G., Eichmeier, A., Jordal, J.B., Kachalkin, A.V., Kubátová, A., Maciá‐Vicente, J.G., Malysheva, E.F., Papp, V., Rajeshkumar, K.C., Sharma, A., Spetik, M., Szabóová, D., Tomashevskaya, M.A., Abad, J.A., Abad, Z.G., Alexandrova, A.V., Anand, G., Arenas, F., Ashtekar, N., Balashov, S., Bañares, Á., Baroncelli, R., Bera, I., Biketova, A.Yu., Blomquist, C.L., Boekhout, T., Boertmann, D., Bulyonkova, T.M., Burgess, T.I., Carnegie, A.J., Cobo‐Diaz, J.F., Corriol, G., Cunnington, J.H., da Cruz, M.O., Damm, U., Davoodian, N., de A. Santiago, A.L.C.M., Dearnaley, J., de Freitas, L.W.S., Dhileepan, K., Dimitrov, R., Di Piazza, S., Fatima, S., Fuljer, F., Galera, H., Ghosh, A., Giraldo, A., Glushakova, A.M., Gorczak, M., Gouliamova, D.E., Gramaje, D., Groenewald, M., Gunsch, C.K., Gutiérrez, A., Holdom, D., Houbraken, J., Ismailov, A.B., Istel, Ł., Iturriaga, T., Jeppson, M., Jurjević, Ž., Kalinina, L.B., Kapitonov, V.I., Kautmanova, I., Khalid, A.N., Kiran, M., Kiss, L., Kovács, Á., Kurose, D., Kusan, I., Lad, S., Læssøe, T., Lee, H.B., Luangsa‐ard, J.J., Lynch, M., Mahamedi, A.E., Malysheva, V.F., Mateos, A., Matočec, N., Mešić, A., Miller, A.N., Mongkolsamrit, S., Moreno, G., Morte, A., Mostowfizadeh‐Ghalamfarsa, R., Naseer, A., Navarro‐Ródenas, A., Nguyen, T.T.T., Noisripoom, W., Ntandu, J.E., Nuytinck, J., Ostrý, V., Pankratov, T.A., Pawłowska, J., Pecenka, J., Pham, T.H.G., Polhorský, A., Posta, A., Raudabaugh, D.B., Reschke, K., Rodríguez, A., Romero, M., Rooney‐Latham, S., Roux, J., Sandoval‐Denis, M., Smith, M.Th., Steinrucken, T.V., Svetasheva, T.Y., Tkalčec, Z., van der Linde, E.J., v.d. Vegte, M., Vauras, J., Verbeken, A., Visagie, C.M., Vitelli, J.S., Volobuev, S.V., Weill, A., Wrzosek, M., Zmitrovich, I.V., Zvyagina, E.A. & Groenewald, J.Z. (2021) Fungal Planet description sheets: 1182–1283. <em>Persoonia</em> 46: 313–528. https://doi.org/10.3767/persoonia.2021.46.11</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Dehghani, M.H., Bazargani, A. & Mirdoraghi, M. (2019) Assessment of UV radiation emitted by linear fluorescent lamps in Iran. <em>MethodsX</em> 6: 477–481. https://doi.org/10.1016/j.mex.2019.02.031</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Edler, D., Klein, J., Antonelli, A. & Silvestro, D. (2021) raxmlGUI 2.0: a graphical interface and toolkit for phylogenetic analyses using RAxML. <em>Methods in Ecology and Evolution </em>12 (2): 373–377. https://doi.org/10.1111/2041-210X.13512 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Eriksson, O.E. (1981) The families of bitunicate ascomycetes. <em>Opera Botanica</em> 60: 1–220. https://doi.org/10.1111/j.1756-1051.1981.tb01167.x</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Eriksson, O.E. & Hawksworth, D.L. (1986) An alphabetical list of the generic names of ascomycetes – 1986. <em>Systema Ascomycetum</em> 5: 3–111.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Eriksson, O.E. & Hawksworth, D.L. (1991) Outline of the ascomycetes – 1990. <em>Systema Ascomycetum</em>, Reprint of Volumes 1–4 (1982–1985) 9: 39–271.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Georgousaki, K., González-Menéndez, V., Tormo, J.R., Tsafantakis, N., Mackenzie, T.A., Martín, J., Gumeni, S., Trougakos, I.P., Reyes, F., Fokialakis, N. & Genilloud, O. (2022) Comoclathrin, a novel potent skin-whitening agent produced by endophytic <em>Comoclathris</em> strains associated with Andalusia desert plants. <em>Scientific Reports</em> 12: 1649. https://doi.org/10.1038/s41598-022-05448-9</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">González-Menéndez, V., Crespo, G., De Pedro, N., Diaz, C., Martín, J., Serrano, R., Mackenzie, T.A., Justicia, C., González-Tejero, M.R., Casares, M. & Vicente, F. (2018) Fungal endophytes from arid areas of Andalusia: high potential sources for antifungal and antitumoral agents. <em>Scientific reports</em> 8 (1): 1–13. https://doi.org/10.1038/s41598-018-28192-5</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. <em>Nucleic</em> <em>Acids Symposium Series </em>41: 95–98. https://doi.org/10.1093/bib/bbx108</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Hongsanan, S., Hyde, K.D., Phookamsak, R., Wanasinghe, D.N., McKenzie, E.H.C., Sarma, V.V., Boonmee, S., Lücking, R., Bhat, J.D., Liu, N., Tennakoon, D.S., Pem, D., Karunarathna, A., Jiang, S.H., Jones, E.B.G., Phillips, A.J.L., Manawasinghe, I., Tibpromma, S., Jayasiri, S.C., Sandamali, D., Jayawardena, R.S., Wijayawardene, N.N., Ekanayaka, A.H., Jeewon, R., Lu, Y.Z., Dissanayake, A.J., Zeng, X.Y., Luo, Z.L., Tian, Q., Phukhamsakda, C., Thambugala, K.M., Dai, D.Q., Chethana, T.K.W., Samarakoon, M.C., Ertz, D., Doilom, M., Liu, J.K., Pérez-Ortega, S., Suija, A., Senwanna, C., Wijesinghe, S.N., Konta, S., Niranjan, M., Zhang, S.N., Ariyawansa, H.A., Jiang, H.B., Zhang, J.F., Norphanphoun, C., de Silva, N.I., Thiyagaraja, V., Zhang, H., Bezerra, J.D.P., Miranda-González, R., Aptroot, A., Kashiwadani, H., Harishchandra, D., Sérusiaux, E., Aluthmuhandiram, J.V.S., Abeywickrama, P.D., Bao, D.F., Devadatha, B., Wu, H.X., Moon, K.H., Gueidan, C., Schumm, F., Bundhun, D., Mapook, A., Monkai, J., Chomnunti, P., Suetrong, S., Chaiwan, N., Dayarathne, M.C., Jing, Y., Rathnayaka, A.R., Bhunjun, C.S., Xu, J.C., Zheng, J.S., Liu, G., Feng, Y. & Xie, N. (2020) Refined families of Dothideomycetes: Dothideomycetidae and Pleosporomycetidae. <em>Mycosphere</em> 11: 1553–2107. https://doi.org/10.5943/mycosphere/11/1/13 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Hyde, K.D., Jones, E.B.G., Liu, J.K., Ariyawansa, H., Boehm, E., Boonmee, S., Braun, U., Chomnunti, Crous, P.W., Dai, D.Q., Diederich, P., Dissanayake, A., Doilom, M., Doveri, F., Hongsanan, S., Jayawardena, R., Lawrey, J.D., Li, Y.M., Liu, Y.X., Lücking, R., Monkai, J., Muggia, L., Nelsen, M.P., Pang, K.L., Phookamsak, R., Senanayake, L.C., Shearer, C.A., Suetrong, S., Tanaka, K., Thambugala, K.M., Wijayawardene, N.N., Wikee, S., Wu, H.X., Zhang, Y., Aguirre-Hudson, B., Alias, S.A., Aptroot, A., Bahkali, A., Bezerra, J.L., Bhat, D.J., Camporesi, E., Chukeatirote, E., Gueidan, C., Hawksworth, D.L., Hirayama, K., De Hoog, S., Kang, J.C., Knudsen, K., li, W.J., Li, X.H., liu, Z.Y., Mapook, A., McKenzie, E.H.C., Miller, A.N., Mortimer, P., Phillips, A.J.L., Raja, H.A., Scheuer,C., Schumm, C., Taylor, J.E., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Wang, Y., Xu, j.C., Yacharoen, S., yan, J.Y. & Zhang, M. (2013) Families of Dothideomycetes. <em>Fungal Diversity</em> 63: 1−313. http://dx.doi.org/10.1007/s13225-013-0263-4</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Hyde, K.D., Hongsanan, S., Jeewon, R., Bhat, D.J., McKenzie, E.H.C., Jones, E.B.G., Phookamsak, R., Ariyawansa, H.A., Boonmee, S., Zhao, Q., Abdel-Aziz, F.A., Abdel-Wahab, M.A., Banmai, S., Chomnunti, P., Cui, B.K., Daranagama, D.A., Das, K., Dayarathne, M.C., de Silva, N.I., Dissanayake, A.J., Doilom, M., Ekanayaka, A.H., Gibertoni, T.B., Góes-Neto, A., Huang, S.K., Jayasiri, S.C., Jayawardena, R.S., Konta, S., Lee, H.B., Li, W.J., Lin, C.G., Liu, J.K., Lu, Y.Z., Luo, Z.L., Manawasinghe, I.S., Manimohan, P., Mapook, A., Niskanen, T., Norphanphoun, C., Papizadeh, M., Perera, R.H., Phukhamsakda, C., Richter, C., Santiago, A.L.C.M. de A., Drechsler-Santos, E.R., Senanayake, I.C., Tanaka, K., Tennakoon, T.M.D.S., Thambugala, K.M., Tian, Q., Tibpromma, S., Thongbai, B., Vizzini, A., Wanasinghe, D.N., Wijayawardene, N.N., Wu, H.X., Yang, J., Zeng, X.Y., Zhang, H., Zhang, J.F., Bulgakov, T.S., Camporesi, E., Bahkali, A.H., Amoozegar, M.A., Araujo-Neta, L.S., Ammirati, J.F., Baghela, A., Bhatt, R.P., Bojantchev, D., Buyck, B., da Silva, G.A., de Lima, C.L.F., de Oliveira, R.J.V., de Souza, C.A.F., Dai, Y.C., Dima, B., Duong, T.T., Ercole, E., Freire, F.M., Ghosh, A., Hashimoto, A., Kamolhan, S., Kang, J.C., Karunarathna, S.C., Kirk, P.M., Kytövuori, I., Lantieri, A., Liimatainen, K., Liu, Z.Y., Liu, X.Z., Lücking, R., Medardi, G., Mortimer, P.E., Nguyen, T.T.T., Promputtha, I., Raj, K.N.A., Reck, M.A., Lumyong, S., Shahzadeh-Fazeli, S.A., Stadler, M., Soudi, M.R., Su, H.Y., Takahashi, T., Tangthirasunun, N., Uniyal, P., Wang, Y., Wen, T.C., Xu, J.C., Zhang, Z.K., Zhao, Y.C., Zhou, J.L. & Zhu, L. (2016) Fungal diversity notes 367–490: taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 80: 1–270. https://doi.org/10.1007/s13225-016-0373-x</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. <em>Briefings in bioinformatics </em>20: 1160–1166. https://doi.org/10.1093/bib/bbx108</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Kodsueb, R., Dhanasekaran, V., Aptroot, A., Lumyong, S., McKenzie, E.H.C., Hyde, K.D. & Jeewon, R. (2006) The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA. <em>Mycologia</em> 98: 571–583. https://doi.org/10.3852/mycologia.98.4.571</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33 (7): 1870–1874. https://doi.org/10.1093/molbev/msw054</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. (2017) PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution 34 (3): 772–773. https://doi.org/10.1093/molbev/msw260</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Li, G.J., Hyde, K.D., Zhao, R.L., Hongsanan, S., Abdel-Aziz, F.A., Abdel-Wahab, M.A., Alvarado, P., Alves-Silva, G., Ammirati, J.F., Ariyawansa, H.A., Baghela, A., Bahkali, A.H., Beug, M., Bhat, D.J., Bojantchev, D., Boonpratuang, T., Bulgakov, T.S., Camporesi, E., Boro, M.C., Ceska, O., Chakraborty, D., Chen, J.J., Chethana, K.W.T., Chomnunti, P., Consiglio, G., Cui, B.K., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Das, K., Dayarathne, M.C., De Crop, E., De Oliveira, R.J.V., de Souza, C.A.F., de Souza, J.I., Dentinger, B.T.M., Dissanayake, A.J., Doilom, M., Drechsler-Santos, E.R., Ghobad-Nejhad, M., Gilmore, S.P., Góes-Neto, A., Gorczak, M., Haitjema, C.H., Hapuarachchi, K.K., Hashimoto, A., He, M.Q., Henske, J.K., Hirayama, K., Iribarren, M.J., Jayasiri, S.C., Jayawardena, R.S., Jeon, S.J., Jerônimo, G.H., Jesus, A.L., Jones, E.B.G., Kang, J.C., Karunarathna, S.C., Kirk, P.M., Konta, S., Kuhnert, E., Langer, E., Lee, H.S, Lee, H.B., Li, W.J., Li, X.H., Liimatainen, K., Lima, D.X., Lin, C.G., Liu, J.K., Liu, X.Z., Liu, Z.Y, Luangsa-ard, J.J., Lücking, R., Lumbsch, H.T., Lumyong, S., Leaño, E.M., Marano, A.V., Matsumura, M., McKenzie, E.H.C., Mongkolsamrit, S., Mortimer, P.E., Nguyen, T.T.T., Niskanen, T., Norphanphoun, C., O’Malley, M.A., Parnmen, S., Pawłowska, Julia, Perera, R.H., Phookamsak, R., Phukhamsakda, C., Pires-Zottarelli, C.L.A., Raspé, O., Reck, M.A., Rocha, S.C.O., de Santiago, A.L.C.M.A., Senanayake, I.C., Setti, L., Shang, Q.J., Singh, S.K., Sir, E.B., Solomon, K.V., Song, J., Srikitikulchai, P., Stadler, M., Suetrong, S., Takahashi, H., Takahashi, T., Tanaka, K., Tang, L.P., Thambugala, K.M., Thanakitpipattana, D., Theodorou, M.K., Thongbai, B., Thummarukcharoen, T., Tian, Q., Tibpromma, S., Verbeken, A., Vizzini, A., Vlasák, J., Voigt, K., Wanasinghe, D.N., Wang, Y., Weerakoon, G., Wen, H.A., Wen, T.C., Wijayawardene, N.N., Wongkanoun, S., Wrzosek, M., Xiao, Y.P., Xu, J.C., Yan, J.Y., Yang, J., Da Yang, S., Hu, Y., Zhang, J.F., Zhao, J., Zhou, L.W., Peršoh, D., Phillips, A.J.L. & Maharachchikumbura, S.S.N. (2016) Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa. <em>Fungal Diversity</em> 78: 1–237. https://doi.org/10.1007/s13225-016-0366-9</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Lumbsch, H.T. & Huhndorf, S.M., (2010) Myconet volume 14. Part one. Outline of Ascomycota—2009. Part two. Notes on ascomycete systematics. Nos. 4751–5113. <em>Fieldiana Life and Earth Sciences</em> 2010 (1): 1–64. https://doi.org/10.3158/1557.1 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Luttrell, E.S. (1955) A taxonomic revision of <em>Helminthosporium sativum</em> and related species. <em>American Journal of Botany</em> 42 (1): 57–68. https://doi.org/10.2307/2438594</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Luttrell, E.S. (1973) Loculoascomycetes.<em> In: </em>Ainsworth, G.C., Sparrow, F.K. & Sussman, A.S. (Eds.) <em>The fungi, an advanced treatise, a taxonomic review with keys: ascomycetes and fungi imperfecti</em>. Academic, New York.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Mattoo, A.J. & Nonzom, S. (2022a) <em>Parathyridaria ephedrae</em> sp. nov. (Thyridariacaeae, Pleosporales), endophytic to <em>Ephedra gerardiana</em> in India. <em>Phytotaxa</em> 556 (2): 149–159. https://doi.org/10.11646/phytotaxa.556.2.4</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Mattoo, A.J. & Nonzom, S. (2022b) Investigating diverse methods for inducing sporulation in endophytic fungi. <em>Studies in fungi</em> 7 (16): 1–10. https://doi.org/10.48130/SIF-2022-0016</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Mattoo, A.J. & Nonzom, S. (2022c) Endophytes in Lignin Valorization: A Novel Approach. <em>Frontiers in Bioengineering and Biotechnology</em> 10: 895414. https://doi.org/10.3389/fbioe.2022.895414 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Mattoo, A.J. & Nonzom, S. (2023) <em>Astragalicola ephedrae</em> sp. nov., isolated from the stem of <em>Ephedra gerardiana</em> in Ladakh, India. <em>Folia Microbiologica.</em> https://doi.org/10.1007/s12223-023-01041-3 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Manawasinghe, I.S., Zhang, Y.X., Liao, C.F., Xiong, Y.R., Kularathnage, N.D., Luo, M., Chen, J.W., Mai, Z.L., Yang, Y.H., Zhao, H.J. & Doilom, M. (2022) Mycosphere notes 345–386. <em>Mycosphere</em> 13 (1): 454–557. https://doi.org/10.5943/mycosphere/13/1/3</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Moral, J., Agusti-Brisach, C, Perez-Rodriguez, M., Xavier, C., Raya, M.C., Rhouma, A. & Trapero, A. (2017) Identification of fungal species associated with branch dieback of olive and resistance of table cultivars to <em>Neofusicoccum</em> <em>mediterraneum</em> and <em>Botryosphaeria</em> <em>dothidea</em>. <em>Plant Disease</em> 101 (2): 306–16. https://doi.org/10.1094/PDIS-06-16-0806-RE</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Nitschke, T.R. (1869) Pleosporaceae. <em>Verhandlungen des Naturhistorischen Vereins der Preussischen Rheinlande</em> 26: 74.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Petrini, O. (1986) Taxonomy of endophytic fungi of aerial plant tissues. <em>In</em>: Fokkema, N.J. & Van den Heuvel, J. (Eds.) <em>Microbiology of the phyllosphere.</em> Cambridge University Press. pp. 175–187.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Pande, A. (1980) Ascomycetes of Western India VIII. <em>Sydowia</em> 33: 236–241. https://doi.org/10.1590/0034-716719800002000012</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Patil, M.S. & Pawar, A.B. (1989) Studies on foliicolous ascomycetes – IV. <em>Indian</em> <em>Phytopathology</em> 39 (4): 515–520.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Rambaut, A., Suchard, M.A., Xie, D. & Drummond, A.J. (2014) Tracer version 1.6. Available from: https://beast.bio.ed.ac.uk/tracer (accessed 24 March 2023)</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. <em>Systematic Biology</em> 61 (3): 539–542. https://doi.org/10.1093/sysbio/sys029</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Sambrook, J., Fritsch, E.F. & Maniatis, T. (1989) <em>Molecular Cloning: A Laboratory Manual</em>, 2nd Edn. Cold Spring Harbor Laboratory Press, New York, USA.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Sivanesan, A. (1984) <em>The bitunicate Ascomycetes and their anamorphs.</em> Vaduz, Germany: Strauss and Cramer.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Shoemaker, R.A. & Babcock, C.E. (1992) Applanodictyosporous <em>Pleosporales</em>: <em>Clathrospora, Comoclathris, GraphyIlium, Macrospora</em>, and <em>Platysporoides</em>. <em>Canadian Journal of Botany</em> 70: 1617–1658. https://dx.doi.org/10.1139/b92-204</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Theissen, F. & Sydow, H. (1918) Vorentwürfe zu den Pseudosphaeriales. <em>Annales Mycologici</em> 16: 1–34.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Thambugala, K.M., Wanasinghe, D.N., Phillips, A.J.L., Camporesi, E., Bulgakov, T.S., Phukhamsakda, C., Ariyawansa, H.A., Goonasekara, I.D., Phookamsak, R., Dissanayake, A., Tennakoon, D.S., Tibpromma, S., Chen, Y.Y., Liu, Z.Y. & Hyde, K.D. (2017) Mycosphere notes 1–50: Grass (<em>Poaceae</em>) inhabiting <em>Dothideomycetes</em>. <em>Mycosphere</em> 8: 697–79. https://doi.org/10.5943/mycosphere/8/4/13</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several <em>Cryptococcus </em>species. <em>Journal of Bacteriology </em>172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Von Arx, J.A. & Müller, E. (1975) A re-evaluation of the bitunicate ascomycetes with keys to families and genera. <em>Studies in Mycology</em> 9: 1–159.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Vu, D., Groenewald, M., De Vries, M., Gehrmann, T., Stielow, B., Eberhardt, U., Al-Hatmi, A., Groenewald, J.Z., Cardinali, G., Houbraken, J. & Boekhout, T. (2019) Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. <em>Studies in</em> <em>mycology</em> 92 (1): 135–54. https://doi.org/10.1016/j.simyco.2018.05.001 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wanasinghe, D.N., Gareth, J.E.B., Camporesi, E. & Hyde, K.D. (2015) A new species of the genus <em>Comoclathris</em> (Pleosporaceae). <em>Journal of Fungal Research </em>13: 260–268.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wanasinghe, D.N., Phukhamsakda, C., Hyde, K.D., Jeewon, R., Lee, H.B., Jones, E.B.G., Tibpromma, S., Tennakoon, D.S., Dissanayake, A.J., Jayasiri, S.C., Gafforov, Y., Camporesi, E., Bulgakov, T.S., Ekanayake, A.H., Perera, R.H., Samarakoon, M.C., Goonasekara, I.D., Mapook, A., Li, W.J., Senanayake, I.C., Li, J., Norphanphoun, C., Doilom, M., Bahkali, A.H., Xu, J., Mortimer, P.E., Tibell, L., Savic, S.T. & Karunarathna, S.C. (2018) Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae. <em>Fungal Diversity</em> 89: 1–236. https://doi.org/10.1007/s13225-018-0395-7</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wehmeyer, L.E. (1961) <em>A world monograph of the genus Pleospora and its segregates.</em> University of Michigan Press, Michigan.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wehmeyer, L.E. (1975) <em>The pyrenomycetous fungi.</em> Mycologia Memoir No. 6. The New York Botanical Garden. J. Cramer, Germany.</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">White, T.J., Burns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. <em>In</em>: Innis, M.A., Gleaned, D.H., Sninsky, J.J. & White, T.J. (Eds.) <em>PCR protocols, a guide to methods and applications. </em>Academic, San Diego, pp. 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Woudenberg, J.H.C., Groenewald, J.Z., Binder, M. & Crous, P.W. (2013) <em>Alternaria</em> redefined. <em>Studies in Mycology</em> 75: 171–212. https://dx.doi.org/10.1007/s13225-015-0323-z</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Woudenberg, J.H., Hanse, B., Van Leeuwen, G.C., Groenewald, J.Z. & Crous, P.W. (2017) <em>Stemphylium</em> revisited. <em>Studies in Mycology</em> 87 (1): 77–103. https://doi.org/10.1016/j.simyco.2017.06.001 </span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wijayawardene, D.N.N., Crous, P.W., Kirk, P.M., Hawksworth, D.L., Boonmee, S., Braun, U., Chomnunti, P., Dai, D.Q., D’souza, M.J., Diederich, P., Dissanayake, A., Doilom, M., Hongsanan, S., Jones, E.B.G., Groenewald, J.Z., Jayawardena, R., Lawrey, J.D., Liu, J.K., Lücking, R., Madrid, H., Manamgoda, D.S., Muggia, L., Nelsen, M.P., Phookamsak, R., Suetrong, S., Tanaka, K., Thambugala, K.M., Wikee, S., Zhang, Y., Aptroot, A., Ariyawansa, H.A., Bahkali, A.H., Bhat, J.D., Gueidan, C., De-Hoog, G.S., Knudsen, K., Mckenzie, E.H.C., Miller, A.N., Mortimer, P.E., Wanasinghe, D.N., Phillips, A.J.L., Raja, H.A., Slippers, B., Shivas, R.S., Taylor, J.E., Wang, Y., Woudenberg, J.H.C., Piątek, M., Cai, L., Jaklitsch, W.M. & Hyde, K.D. (2014) Naming and outline of Dothideomycetes 2014 including proposals for the protection or suppression of generic names. <em>Fungal Diversity</em> 69: 1–55. https://dx.doi.org/10.1007/s13225-014-0309-2</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wijayawardene, N.N., Hyde, K.D., Rajeshkumar, K.C., Hawksworth, D.L., Hugo, M., Kirk, P.M., Braun, U., Singh, R.V., Crous, P.W., Kukwa, M., Robert, L., Kurtzman, C.P., Yurkov, A., Haelewaters, D., Aptroot, A., Lumbsch, H.T., Timdal, E., Damien, E., Javier, E., Phillips, A.J.L., Groenewald, J.Z., Papizadeh, J.Z., Selbmann, L., Dayarathne, M.C., Weerakoon, M.C., Jones, E.B.G., Suetrong, S., Tian, Q., Castañeda-Ruiz, R.F., Bahkali, A.H., Pang, K.L., Tanaka, K., Dai, D.Q., Jariya, S., Martina, H., Lorenzo, L., Shenoy, B.D., Suija, A., Maharachchikumbura, S.S.N., Thambugala, K.M., Wanasinghe, D.N., Sharma, B.O., Gaikwad, S., Pandit, G., Laura, Z., Silvano, O., Eleonora, E., Raja, H.A., Kodsueb, R., Cáceres, M.E.S., Sergio, P.O., Fiuza, P.O., Monteiro, J.S., Vasilyeva, L.N., Shivas, R.G., Maria, P., Wedin, M., Ibai, O., Lateef, A.A., Yamini, A., Fazeli, S.A.S., Mohammad, A.A., Zhao, G.Z., Pfliegler, W.P., Sharma, G., Magdalena, O., Abdel-Wahab, M.A., Takamatsu, S., Konstanze, B., Silva, N.I., Karunarathna, A.D.K., Saranyaphat, B., Pfister, D.H., Lu, Y.Z., Luo, Z.L., Nattawut, B., Daranagama, D.A., Senanayake, I.C., Jayasiri, S.C., Milan, C.S., Zeng, X.Y., Doilom, M., Quijada, L., Sillma, R., Heredia, G., Dissanayake, A.J., Jayawardana, R.S., Perera, R.H., Li, Z.T., Phukhamsakda, C., Margarita, H.R., Ma, X.Y., Saowaluck, T., Gusmao, L.F.P., Weerahewa, D. & Karunarathna, S.C. (2017) Notes for genera: Ascomycota. <em>Fungal Diversity</em> 86: 1–594. https://doi.org/10.1007/s13225-017-0386-0</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Wijayawardene, N.N., Hyde, K.D., Dai, D.Q., Sánchez-García, M., Goto, B.T., Saxena, R.K., Erdoðdu, M., Selçuk, F., Rajeshkumar, K.C., Aptroot, A., Błaszkowski, J., Boonyuen, N., da Silva, G.A., de Souza, F.A., Dong, W., Ertz, D., Haelewaters, D., Jones, E.B.G., Karunarathna, S.C., Kirk, P.M., Kukwa, M., Kumla, J., Leontyev, D.V., Lumbsch, H.T., Maharachchikumbura, S.S.N., Marguno, F., Martínez-Rodríguez, P., Mešić, A., Monteiro, J.S., Oehl, F., Pawłowska, J., Pem, D., Pfliegler, W.P., Phillips, A.J.L., Pošta, A., He, M.Q., Li, J.X., Raza, M., Sruthi, O.P., Suetrong, S., Suwannarach, N., Tedersoo, L., Thiyagaraja, V., Tibpromma, S., Tkalčec, Z., Tokarev, Y.S., Wanasinghe, D.N., Wijesundara, D.S.A., Wimalaseana, S.D.M.K., Madrid, H., Zhang, G.Q., Gao, Y., Sánchez-Castro, I., Tang, L.Z., Stadler, M., Yurkov, A. & Thines, M. (2022) Outline of fungi and fungus-like taxa–2021. <em>Mycosphere </em>13: 53–453. https://doi.org/10.5943/mycosphere/13/1/2</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Zhang, Y., Schoch, C.L., Fournier, J., Crous, P.W., De Gruyter, J., Woudenberg, J.H.C., Hirayama, K., Tanaka, K., Pointing, S.B. & Hyde, K.D. (2009) Multilocus phylogeny of the Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. <em>Studies in Mycology</em> 64: 85–102. https://doi.org/10.3114/sim.2009.64.04</span></span></span></p>
<p align="justify"><span style="color: #000000;"><span style="font-family: Times New Roman, serif;"><span style="font-size: small;">Zhang, Y., Crous, P.W., Schoch, C.L. & Hyde, K.D. (2012) <em>Pleosporales</em>. <em>Fungal Diversity</em> 53: 1−221. https://dx.doi.org/10.1007/s13225-011-0117-x</span></span></span></p>