Abstract
The documentation of rust fungi in tropical Africa is very incomplete. For West Africa, 332 species of rust fungi (Pucciniales, Basidiomycota) are recorded, including only six species from Benin. By a recent survey of rust fungi in Benin, 22 specimens representing 11 species of Pucciniales were found. These species were identified based on morphological characteristics observed by light microscopy. Nine species represent new records of rust fungi for Benin. Among them, Neophysopella tropicalis on Vitis sp. is recorded for Africa for the first time. Nucleotide sequences of the LSU region of ribosomal DNA confirmed identifications of five species, for which sequences were available in GenBank for comparison. For three species, annotated LSU and ITS barcode sequences are provided for the first time. Puccinia canaliculata var. tenuis on Cyperus spp., described from South Africa and recorded for Guinea as well as for Benin, is treated as Puccinia doidgeae nom. nov., based on morphological and sequence data.
References
Aime, M.C. & McTaggart, A.R. (2020) A higher-rank classification for rust fungi, with notes on genera. Fungal Systematics and Evolution 7: 21–47. https://doi.org/10.3114/fuse.2021.07.02
Aime, M.C., Bell, C. & Miller, A.N. (2018) Deconstructing the evolutionary complexity of rust fungi (Pucciniales) and their plant hosts. Studies in Mycology 89: 143–152. https://doi.org/10.1016/j.simyco.2018.02.002
Akoègninou, A., Van der Burg, W.J. & Van der Maesen, L.J.G. (2006) Flore analytique du Bénin. Backhuys Publishers, Cotonou & Wageningen, 1034 pp.
Anco, D.J. & Wang, H. (2017) First report of rust caused by Puccinia arachidis on peanut in South Carolina. Plant Disease 102: 676–676. https://doi.org/10.1094/PDIS-08-17-1245-PDN
Baiswar, P., Chandra, S. & Kumar, R. (2008) First report of rust caused by Coleosporium plumeriae on Plumeria alba in India. Plant Pathology 4: 787. https://doi.org/10.1111/j.1365-3059.2008.01870.x
Barreto, R.W. & Evans, H.C. (1995) Mycobiota of the weed Cyperus rotundus in the state of Rio de Janeiro, with an elucidation of its associated Puccinia complex. Mycological Research 99: 407–419. https://doi.org/10.1016/S0953-7562(09)80638-2
Beed, F., Hotegni Houessou, J.H., Kelly, P. & Ezin, V. (2011) First report of Aecidium cantense (potato deforming rust) on Solanum macrocarpon (African eggplant) in Bénin. New Disease Reports 23: 12. https://doi.org/10.5197/j.2044-0588.2011.023.012
Beenken, L. & Berndt, R. (2010) Rust fungi on Annonaceae: the genus Sphaerophragmium. Mycologia 102: 650–663. https://doi.org/10.3852/09-173
Blomquist, C.L., McKemy, J.M., Aime, M.C., Orsburn, R.W. & Kinnee, S.A. (2009) First report of bamboo rust caused by Kweilingia divina on Bambusa domestica in Los Angeles county, California. Plant Disease 93: 201. https://doi.org/10.1094/PDIS-93-2-0201A
Boa, E. & Lenné, J. (1994) Diseases of nitrogen fixing trees in developing countries. An annotated list. Chatham, United Kingdom: Natural Resources Institute, Kent, 82 pp.
Bouhot, D. (1966) Quelques champignons phytopathogènes nouveaux ou peu connus au Sénégal. Bulletin de la Société Mycologique de France 82: 274–300.
Cabral, P.G.C., Capucho, A.S., Pereira, O.L., Maciel-Zambolim, E., Freitas, R.L. & Zambolim, L. (2010) First report of teak leaf rust disease caused by Olivea tectonae in Brazil. Australasian Plant Disease Notes 5: 113–114. https://doi.org/10.1007/BF03215901
Castellani, E. & Ciferri, R. (1937) Prodromus mycoflorae Africae Orientalis Italicae. Istituto Agricolo Coloniale Italiano, Firenze, 167 pp.
Cedas de Jesus, M., Mir-Leyva, S.G., Báez-Solano, A.R. & Tapia-Camacho, M. (2018) Occurrence of rust disease caused by Puccinia thaliae on Canna indica in Mexico. SciFed Journal of Mycology 1: 2.
Chung, WH., Abe, J.P., Yamaoka, Y., Haung, J.W. & Kakishima, M. (2006) First report of Plumeria rust disease caused by Coleosporium plumeriae in Taiwan. Plant Pathology 2: 306. https://doi.org/10.1111/j.1365-3059.2005.01237.x
Corbett, D.C.M. (1964) A supplementary list of plant diseases in Nyasaland. Mycological Paper 95: 1–16.
Crouch, J.A. & Szabo, L.J. (2011) Real-time PCR detection and discrimination of the southern and common corn rust pathogens Puccinia polysora and Puccinia sorghi. Plant Disease 95: 624–632. https://doi.org/10.1094/PDIS-10-10-0745
Crous, P.W., Phillips, A.J.L. & Baxter, A.P. (2000) Phytopathogenic fungi from South Africa. University of Stellenbosch, Department of Plant Pathology Press, South Africa, 358 pp.
Dade, H.A. (1940) A revised list of Gold Coast fungi and plant diseases. Bulletin of Miscellaneous Information (Royal Botanic Gardens, Kew) 6: 205–247. https://doi.org/10.2307/4111591
Daly, A.M., Shivas, R.G., Pegg, G.S. & Mackie, A.E. (2006) First record of teak leaf rust (Olivea tectonae) in Australia. Australasian Plant Disease Notes 1: 25–26. https://doi.org/10.1071/DN06011
Deadman, M.L., Al Sadi, A.M., Al Maqbali, Y.M., Farr, D.F. & Aime, M.C. (2011) Additions to the rust fungi (Pucciniales) from Northern Oman. Sydowia 2: 155–168.
Deighton, F.C. (1936) List of fungi collected in Sierra Leone. Bulletin of Miscellaneous Information 7: 424–433. https://doi.org/10.2307/4111839
Dietel, P. (1903) Über die Uromyces-Arten auf Lupinen. Hedwigia Beiblätter 42: 95–99.
Dixon, L.J., Castlebury, L.A., Aime, M.C., Glynn, N.C. & Comstock, J.C. (2010) Phylogenetic relationships of sugarcane rust fungi. Mycological Progress 9: 459–468. https://doi.org/10.3390/agronomy9120892
Doidge, E.M. (1948) South African rust fungi, part V. Bothalia 4: 895–918. https://doi.org/10.4102/abc.v4i4.1736
Doidge, E.M. (1950) The South African fungi and lichens to the end of 1945. Bothalia 5: 1–1094. https://doi.org/10.4102/abc.v5i1.1880
Ebbels DL & Allen DJ (1979) A supplementary and annotated list of plant diseases, pathogens and associated fungi in Tanzania. Commonwealth Mycological Institute, Kew, Surrey, United Kigdom, 89 pp.
Eboh, D.O. (1978) A taxonomic survey of Nigerian rust fungi: Uredinales Nigerianensis-I. Mycologia 70: 1077–1085. https://doi.org/10.2307/3759139
Eboh, D.O. (1981) A taxonomic survey of Nigerian rust fungi: Uredinales Nigerianensis-II. Mycologia 73: 445–453. https://doi.org/10.1080/00275514.1981.12021367
Eboh, D.O. (1985) Nigerian graminicolous Uredinales: grass rusts from Nsukka II. Mycologia 77: 205–211. https://doi.org/10.1080/00275514.1985.12025086
Eboh, D.O. (1986) Taxonomic survey of Nigerian rust fungi: Uredinales Nigerianensis-IV. Mycologia 78: 577–586. https://doi.org/10.1080/00275514.1986.12025292
Farr, D.F. & Rossmann, A.Y. (2019–2021) Fungal Databases, U.S. National Fungus Collections, ARS, USDA. Available from: https://nt.ars-grin.gov/fungaldatabases/ (Accessed 21 August 2021)
Fischer, M.C., Henck, D.A., Briggs, C.J., Brownstein, J.S., Madoff, L.C., McCraw, S.L. & Gurr, S.J. (2012) Emerging fungal threats to animal, plant and ecosystem health. Nature 484: 186–194. https://doi.org/10.1038/nature10947
Gautam, A.K. & Avasthi, S. (2018) A new record to rust fungi of North Western Himalayas (Himachal Pradesh), India. Studies in Fungi 3: 234–240. https://doi.org/10.5943/sif/3/1/23
Gjaerum, H.B., Namaganda, M. & Lye, K. (2003) Additions to the rust flora of Uganda. Lidia 6: 33–61.
Hennen, J.F., Figueiredo, M.B., de Carvalho, Jr.A.A. & Hennen, P.G. (2005) Catalogue of the species of plant rust fungi (Uredinales) of Brazil. Instituto de Pesquisas, Jardim Botânico do Rio de Janeiro: Rio de Janeiro, Brazil, 490 pp.
Hepper, F.N. (1972) Numerical analysis of the ‘Flora of West tropical Africa’-II: angiosperms (monocotyledons). Kew Bulletin 27: 305–307. https://doi.org/10.2307/4109458
Hernández, J.R., Eboh, D.O. & Rossman, A.Y. (2005) New reports of rust fungi (Uredinales) from Nigeria. Caldasia 2: 213–221.
Huguenin, B. (1959) La rouille américaine du maïs due au Puccinia polysora Underw. Revue de Mycologie 24: 289–323.
Kern, F.D. (1919) North American rusts on Cyperus and Eleocharis. Mycologia 11: 134–47. https://doi.org/10.1080/00275514.1919.12016788
Koffi, N.B.C., N’douba, A.P., Kouassi, C.K., Koffi, A.M.H. & Diallo, H.A. (2018) First occurence of teak leaf rust caused by Olivea tectonae in Cote d’Ivoire and Africa. New Disease Reports 37: 22. https://dx.doi.org/10.5197/j.2044-0588.2018.037.022
Kranz, J. (1964a) Fungi collected in the Republic of Guinea, Collections from the rain forest. Sydowia 17: 132–138.
Kranz, J. (1964b) Fungi collected in the Republic of Guinea, Collections from the Kindia area in 1962. Sydowia 17: 174–185.
Kranz, J. (1966) Fungi collected in the Republic of Guinea III. Collections from the Kindia area 1963-64, and host index. Sydowia 19: 92–107.
Leather, R.I. (1959) Diseases of economic plants in Ghana other than cacao. Chief Agricultural Officer, Ghana Ministry of Food and Agriculture, Agricultural Division.
Lenné, J.M. (1990) A world list of fungal diseases of tropical pasture species. Phytopathological Papers, vol 31. CAB International, Wallingford, United Kingdom.
Lohsomboon, P., Kakishima, M. & Ono, Y. (1994) A monograph of Sphaerophragmium (Uredinales). Mycological Research 98: 907–919. https://doi.org/10.1016/S0953-7562(09)80262-1
Lorrain, C., Gonçalves dos Santos, K.C., Germain, H., Hecker, A. & Duplessis, S. (2018) Advances in understanding obligate biotrophy in rust fungi. New Phytologist 3: 1190–1206. https://doi.org/10.1111/nph.15641
Lutz, M., Bauer, R., Begerow, D. & Oberwinkler, F. (2004) Tuberculina – Thanatophytum/Rhizoctonia crocorum – Helicobasidium: a unique mycoparasitic–phytoparasitic life strategy. Mycological Research 3: 227–238. https://doi.org/10.1017/S0953756204009359
Marleyn, P.S., Diourté, M., Neya, A., Nutsugah, S.K., Sérémé, P., Katilé, S.O., Hess, D.E., Mbaye, D.F. & Ngoko, Z. (2002) Sorghum and pearl millet diseases in West and Central Africa. In: Leslie, J.F. (Ed.) Sorghum and millets diseases. Third Global Conference on Sorghum and Millets Diseases in Guanajuato, Mexico, Lowa State Press, Ames, pp. 419–425. https://doi.org/10.1002/9780470384923.ch70
Marin-Felix, Y., Groenewald, J.Z., Cai, L., Chen, Q., Marincowitz, S., Barnes, I., Bensch, K., Braun, U., Camporesi, E., Damm, U. & De Beer, Z.W. (2017) Genera of phytopathogenic fungi: GOPHY 1. Studies in Mycology 86: 99–216. https://doi.org/10.1016/j.simyco.2017.04.002
McTaggart, A.R. & Aime, M.C. (2018) The species of Coleosporium (Pucciniales) on Solidago in North America. Fungal Biology 8: 800–809. https://doi.org/10.1016/j.funbio.2018.04.007
McTaggart, A.R., Doungsa-Ard, C., Geering, A.D., Aime, M.C. & Shivas, R.G. (2015) A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its Acacia hosts in Australia. Persoonia 35: 50–62. https://doi.org/10.3767/003158515X687588
McTaggart, A.R., Beasley, D.R., Wingfield, M.J., Wood, A.R., Pretorius, Z.A., Drenth, A., Shivas, R.G. & Roux, J. (2017) A dynamic, web-based resource to identify rust fungi (Pucciniales) in southern Africa. MycoKeys 26: 77–83. https://doi.org/10.3897/mycokeys.26.14602
Nelson, S. (2013) Rust on Canna lily. Plant Disease 96: 1–4.
Ono, Y., Chatasiri, S., Pota, S. & Yamaoka, Y. (2012) Phakopsora montana, another grapevine leaf rust pathogen in Japan. Journal of General Plant Pathology 78: 338–347. https://doi.org/10.1007/s10327-012-0401-y
Ono, Y., Okane, I., Chatasiri, S., Pota, S., Unartngam, J., Ayawong, C., Nguyen, H.D. & Le, C.T. (2020) Taxonomy of Southeast Asian-Australasian grapevine leaf rust fungus and its close relatives. Mycological Progress 9: 905–919. https://doi.org/10.1007/s11557-020-01607-2
Orieux, L. & Felix, S. (1968) List of plant diseases in Mauritius. Phytopathological Papers 7: 1–48.
Padamsee, M. & McKenzie, E.H.C. (2012) First report of Puccinia thaliae on canna lily in New Zealand and in some Pacific island countries. Australasian Plant Disease Notes 7: 139–141. https://dx.doi.org/10.1007/s13314-012-0069-3
Padamsee, M. & McKenzie, E.H.C. (2017) The intriguing and convoluted life of a heteroecious rust fungus in New Zealand. Plant Pathology 8: 1248–1257. https://doi.org/10.1111/ppa.12672
Pavgi, M.S. (1972) Morphology and taxonomy of the Puccinia species on corn and sorghum. Mycopathologia et Mycologia applicata 47: 207–220. https://doi.org/10.1007/BF02051659
Peregrine, T.H. & Siddiqi, M.A. (1972) A revised and annotated list of plant diseases in Malawi. Phytopathological Papers 16: 1–51.
Pfunder, M., Schürch, S. & Roy, B.A. (2001) Sequence variation and geographic distribution of pseudoflower-forming rust fungi (Uromyces pisi s. lat.) on Euphorbia cyparissias. Mycological Research 1: 57–66. https://doi.org/10.1017/S0953756200003208
Piepenbring, M., Hofmann, T.A., Kirschner, R., Mangelsdorff, R., Perdomo, O., Rodríguez Justavino, D. & Trampe, T. (2011) Diversity patterns of Neotropical plant parasitic microfungi. Ecotropica 1: 27–40.
Piepenbring, M., Maciá-Vicente, J.G., Codjia, J.E., Glatthorn, C., Kirk, P., Meswaet, Y., Minter, D., Olou, B.A., Reschke, K., Schmidt, M. & Yorou, N.S. (2020) Mapping mycological ignorance–checklists and diversity patterns of fungi known for West Africa. IMA Fungus 11: 1–22. https://doi.org/10.1186/s43008-020-00034-y.
Ramirez-Cabral, N.Y.Z., Kumar, L. & Shabani, F. (2017) Global risk levels for corn rusts (Puccinia sorghi and Puccinia polysora) under climate change projections. Journal of Phytopathology 9: 563–574. https://doi.org/10.1111/jph.12593
Riley, E.A. (1956) A preliminary list of plant diseases in northern Rhodesia. Mycological Papers 63: 1–28.
Roger, L. (1951) Phytopathologie des pays chauds. Encyclopedie Mycologique. Tome 1. P. Lechevalier, Paris, 1126 pp.
Salazar Yepes, M. & De Carvalho Júnior, A. (2013) Uredinales (rust fungi) biota of the Parque Nacional do Itatiaia, Brazil: an analysis of composition, species diversity and altitudinal distribution. Caldasia 35: 165–176.
Savary, S., Bosc, J.-P., Moirot, M. & Zadoks, J. (1988) Peanut rust in West Africa: a new component in a multiple pathosystem. Plant Disease 72: 1001–1009. https://doi.org/10.1094/PD-72-1001
Scholler, M., Lutz, M., Wood, A.R., Hagedorn, G. & Mennicken, M. (2011) Taxonomy and phylogeny of Puccinia lagenophorae: a study using rDNA sequence data, morphological and host range features. Mycological Progress 2: 175–187. https://doi.org/10.1007/s11557-010-0687-0
Spaulding, P. (1961) Foreign diseases of forest trees of the world: an annotated list. US Department of Agriculture, 361 pp.
Subrahmanyam, P., Reddy, L.J., Gibbons, R.W. & McDonald, D. (1985) Peanut rust: a major threat to peanut production in the semiarid tropics. Plant Disease 69: 813–819. https://doi.org/10.1094/PD-69-813
Sydow, H., Sydow, P. & Butler, E.J. (1907) Fungi Indiae Orientalis. Part II. Annual Mycology 5: 485–515.
Tarr, S.A.J. (1963) A supplementary list of Sudan fungi and plant diseases. Mycological Paper 85: 1–31.
Toome, M. & Aime, M.C. (2015) Reassessment of rust fungi on weeping willows in the Americas and description of Melampsora ferrinii sp. nov. Plant Pathology 64: 216–224. https://doi.org/10.1111/ppa.12237
Traquair, J.A. & Kokko, E.G. (1980) Spore morphology in Coleosporium plumeriae. Canadian Journal of Botany 58: 2454–2458. https://doi.org/10.1139/b80-285
Tsatsia, H. & Jackson, G. (2017) Maize American corn rust. Pacific Pests and Pathogens-Fact Sheets 42. Available from: https://app.pestnet.org/Submissions/View?submissionId=25a5f102-4837-4f54-8415-69eede23ac04 (Accessed 5 December 2021)
Van Jaarsveld, L.C., Kriel, M.W. & Minnaar, A. (2007) First report of Puccinia thaliae on Canna lily in South Africa. The American Phytopathological Society 90: 113. https://doi.org/10.1094/PD-90-0113C
Viennot-Bourgin, G. (1958) Urédinales d’Afrique (5e note). Urédinales de Côte d’Ivoire (4e note). Uredineana Encyclopedia of Mycology 5: 137–248.
Viennot-Bourgin, G. (1959) Étude de micromycètes parasites récoltés en Guinée. Annales de l’Institut National Agronomique 45: 1–91.
Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
Wakefield, E.M. & Hansford, C.G. (1949) Contributions towards the fungus flora of Uganda.—IX. the Uredinales of Uganda. Proceedings of the Linnean Society of London 161: 162–197. https://doi.org/10.1111/j.1095-8312.1949.tb00565.x
Wang, Q., Thu, P.Q. & Kakishima, M. (2011) First report of a rust disease of Plumeria caused by Coleosporium plumeriae in Southern China and Vietnam. New Disease Reports 23: 10. https://doi.org/10.5197/j.2044-0588.2011.023.010
Weeraratne, T.P. & Adikaram, N.K. (2006) Biology of Plumeria leaf rust disease caused by Coleosporium plumeriae. Ceylon Journal of Science (Biological Science) 3: 157–162.
Yen, J.-M. (1976a) Les Urédinées de Côte d’Ivoire–I. Revue de Mycologie 40: 125–139.
Yen, J.-M. (1976b) Les Urédinées de Côte d’Ivoire–II. Revue de Mycologie 40: 283–294.
Yun, H.Y. (2020) Invasive fungi. Teak rust–Olivea tectonae. Systematic Mycology and Microbiology Laboratory, ARS, USDA. Available from: /sbmlweb/fungi/index.cfm (Accessed 28 July 2020)
