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Type: Article
Published: 2019-04-24
Page range: 97–106
Abstract views: 27
PDF downloaded: 40

DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China

School of Life Sciences, Yunnan Normal University, Kunming, Yunnan, 650001, China Key Laboratory of Enzyme Engineering, Yunnan Normal University, Kunming, Yunnan, 650001, China
School of Life Sciences, Yunnan Normal University, Kunming, Yunnan, 650001, China Key Laboratory of Enzyme Engineering, Yunnan Normal University, Kunming, Yunnan, 650001, China
CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650204, China
School of Life Sciences, Yunnan Normal University, Kunming, Yunnan, 650001, China Key Laboratory of Enzyme Engineering, Yunnan Normal University, Kunming, Yunnan, 650001, China
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ZHIMIN LI

School of Life Sciences
Eudicots Omphalogramma DNA barcoding ITS phylogenetic relationships

Abstract

One nuclear and three chloroplast DNA markers (internal transcribed spacer [ITS], rbcL, matK, and trnH-psbA) were evaluated from 39 accessions of Omphalogramma (Primulaceae) from the Hengduan Mountains, representing seven species. The discrimination power of the markers at the species level was 14.3% (rbcL), 28.4% (trnH-psbA), 42.9% (matK), and 100% (ITS). The mean value of genetic distance between species for ITS was more than 3-fold that of intraspecific distance; all species were distinguished. Species were differentiated by unique characters, and phylogenetic analysis showed that the Omphalogramma species formed two clear monophyletic clades comprising O. vincaeflora (bootstrapping: 96.8%) and remaining Omphalogramma species (bootstrapping: 97.5%). This study indicated that DNA barcoding is a useful technique in the phylogenetic and taxonomic description of Omphalogramma species.